DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and rasal3

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_005165804.1 Gene:rasal3 / 798492 ZFINID:ZDB-GENE-101130-3 Length:1124 Species:Danio rerio


Alignment Length:1143 Identity:321/1143 - (28%)
Similarity:502/1143 - (43%) Gaps:224/1143 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 LATTNTTPNNNNINGNSNGSTSNTTTTTTTTTLITLRAKSKTLPQNLSPSVVLREAAALDELEK- 356
            |.....:|.:.:.....:|...||....|       .||::|:.|           .|::.||| 
Zfish    24 LVPEQNSPVDQDPRQTEDGKLLNTYKWHT-------GAKAETVAQ-----------GAIERLEKG 70

  Fly   357 KREKYQEKQEKREKLQEKQRQLFGGSTASQIAGSSPYKLQNSCSATSILTHSFPPKNLFLLKSTP 421
            ...|:.:.|..|:.|.|...:  ..|||:: .|.||.|               |.|         
Zfish    71 ASNKWNKMQSWRKALSEDPGE--KSSTANR-GGESPSK---------------PDK--------- 108

  Fly   422 KLSTDIAAATPPNTS-------AICSPPKKSLSFIRRAHSTKVARSNSLLKPNQAGILGSGSGSN 479
                       |.||       |:..||...|:....|.|:..|..:::....|.|.:.....:.
Zfish   109 -----------PTTSRKNPFRRALSEPPGSLLASSAPASSSAQATGSTVQDTTQRGKIRKYLQTV 162

  Fly   480 GLGVHQGVMQGALS--ISCAGDNSSNNG---SWGKHFYQPYDVCPLSLDELNCYFQADQCEKLIC 539
            .....:..:|..::  ..|..|....:.   ||.    .|.:| |: .|..||:.|..|   ::.
Zfish   163 SQRFKKPRLQSTVTEHEKCEPDYVLQDPVRLSWA----PPQEV-PV-WDISNCFLQDGQ---ILI 218

  Fly   540 ERFKIRDLAIHMASASAIGADLSVTTENETTATADDDAGHHSDTSYEKACRRGSAPTTPILGSKQ 604
            .|.:...:.:...::|.:   .||:.:|        .:|.|::.:.:        |..|..|:|.
Zfish   219 PREEEPMMTVRNRASSCL---FSVSLQN--------ISGSHAELNPD--------PVVPSSGTKL 264

  Fly   605 HQTEHNATSRFTNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHESLLSSHAVMSTIDLSCT 669
            ...:...    .....::.....:.||.|:|...........||:  |||....:...:::||..
Zfish   265 KGQDGGV----KGLIKRRLQGDDKRKSSTQLNTAGLSVAARYGSK--ESLSIPVSAAKSLNLSAD 323

  Fly   670 GAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSCGSRQERDLWIYSLRKSIAPNAEHTRRTDNSLK 734
            ....:.|||.|:||.::||||... .....:.|.|..|||.||..||::..||.::..||:|||.
Zfish   324 QTTVIRPVHSSILGEKYCFQVINS-ENNHCFGCTSAAERDRWIEDLRRTAHPNKDNCERTENSLC 387

  Fly   735 MWVYEAKNLPPKKRYFCELQLDKTLYGRTSVK-----LQTD--------------------LLFW 774
            :|:.|||:|||||||:||:.||.||:.|||.:     :|..                    .|||
Zfish   388 LWINEAKDLPPKKRYYCEVHLDGTLFARTSSRAVGKSVQRSSQAVDGGSGAFGSGGTSGGCQLFW 452

  Fly   775 GEHFDFPDIPEINVITVNVFREVDKKKKRDK-----YQFVGSVKIPVHDVTSRLPCEQWYPILSD 834
            ||.|:..::|.:..||:::|:..|.||||..     ...:|||.:|:.|:..|...|:||.|::.
Zfish   453 GEFFELDNLPPVTQITLHLFKGEDPKKKRHSRDDATLHPLGSVALPLADIKGRAYQEKWYRIVAY 517

  Fly   835 KAGDSLGRTSGGGGSGSKDKEQL-PTLRIKCRFQSTDILPINVYGNFLTYLKENYKRVCETLEPV 898
            |.         .|.|.:||..:| .::|:|.:|::..||||..|..|..|:..||..:|.:|||:
Zfish   518 KP---------PGTSTAKDSVELQASIRVKAKFKNLKILPIERYKEFAEYVTVNYVDMCSSLEPL 573

  Fly   899 IGVKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGD-QRLTFRGNSLATKSMEAFLKLTGE 962
            :.|:.||::..|||.::.:.|.|..||.|:.:.::.|:|: :.|.||.|:||||:::.::||.|:
Zfish   574 LNVREKEELAGALVHVLQSIGKAKEFLIDLGSAEVQRLGENEALIFRENTLATKAIDEYMKLVGQ 638

  Fly   963 QYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAALRGAVRGAWQCIFESHKHFPAQL 1027
            :||.|||...|..|.....:|||||.|.|.|   .|...|..|:.......:.|.:..:.|||:|
Zfish   639 KYLIDTLGDFIARLYNGGENCEVDPLKCSPS---DLPINQRHLKETCEDVVKRITDMQESFPAEL 700

  Fly  1028 RNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTL 1092
            .:.|:::....:..|:||:...|||||:|||||||||||||||.:|...|.....|.|||.||.:
Zfish   701 NDIFSSWVSDCEDRGQQDIGQRLISASLFLRFLCPAILSPSLFGLTQPYPETNTLRTLTLTAKVI 765

  Fly  1093 QTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPEHPAPDSILDWAGYIDQGKQLSIL 1157
            |.|||||.|..||.:|.|:||||.|....|:.||:.:| .||.....|..|  ||:|...:|::|
Zfish   766 QNLANFTLFGEKEEYMFFMNDFLTQHWEPMRDFLQKVS-NPESEITMSRFD--GYVDLPLRLAVL 827

  Fly  1158 HSLLSESLAKLPEARQHELDPLQHILDEISRAKEH-------GMGTALPGG-YLPATSSTHSIAS 1214
            |:||.:.::.:.:.:...|.||..||::|:....|       ....|:|.. |:|...       
Zfish   828 HNLLVDIISVMKQDQIDNLHPLPRILNQITEFLGHDAQQIPVSSNQAMPKPIYVPPRD------- 885

  Fly  1215 ENQENRNPGSSGSHAGSNSEQLLPQQS--QLAQPQHAIVSKPLSA-----ERGIMRGVLTPNSLE 1272
                                  ||:.|  |.:..|..|.|||...     .|.:.|....||   
Zfish   886 ----------------------LPKYSPLQTSMQQLPIDSKPNQCTKERQRRQVQRAFSVPN--- 925

  Fly  1273 KNIFRYNDPTVNGLLQQQQQQQQQQQQQQQQHQQLQQHGHQQQPHHQHPLQMLSNSQTSIAGN-- 1335
                            :..:||:|..::|..:::|..........|:..:...||.:.|.|..  
Zfish   926 ----------------RPSRQQRQPMKRQASNEELPTQCPDDNQDHRLEISPPSNPEKSKAAAAA 974

  Fly  1336 --QYMSSPGGLQHAQSQTSMASSSLNGSSSNLLHGHQQ 1371
              .::..|.|.:..|.:..      :...:|.|..|.|
Zfish   975 KVHWIKQPDGSETCQVRRQ------DREETNTLDKHAQ 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 32/113 (28%)
PH <656..720 CDD:278594 21/63 (33%)
C2_SynGAP_like 721..874 CDD:175980 64/183 (35%)
RasGAP 856..1185 CDD:214617 133/330 (40%)
RasGAP_DAB2IP 865..1192 CDD:213338 131/327 (40%)
rasal3XP_005165804.1 PH_RasSynGAP-like 256..382 CDD:270082 35/132 (27%)
C2_SynGAP_like 374..549 CDD:175980 64/183 (35%)
RasGAP 532..859 CDD:214617 133/332 (40%)
RasGAP_DAB2IP 540..862 CDD:213338 131/327 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577558
Domainoid 1 1.000 103 1.000 Domainoid score I6712
eggNOG 1 0.900 - - E1_KOG3508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D44624at33208
OrthoFinder 1 1.000 - - FOG0000844
OrthoInspector 1 1.000 - - otm24616
orthoMCL 1 0.900 - - OOG6_102644
Panther 1 1.100 - - O PTHR10194
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X495
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.750

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