DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and RASA2

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_016862457.1 Gene:RASA2 / 5922 HGNCID:9872 Length:872 Species:Homo sapiens


Alignment Length:608 Identity:148/608 - (24%)
Similarity:245/608 - (40%) Gaps:134/608 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   621 KKSNPLKRTKSVTKLERTKRGSGGLRGSRSHES-------LLSSHAV---MSTIDLSCTGAVGVA 675
            ||.:.|.|.::..|.||.|        ::..||       .|..|.:   ..||:|.........
Human    43 KKKSKLCRRETSKKKERLK--------NKKAESEAKNLLPYLGPHKMRDCFCTINLDQEEVYRTQ 99

  Fly   676 PVHQSV---LGRRHCFQVRGGPRGERYYSC----GSRQERDLWI--YSLRK-------------S 718
            .|.:|:   ......|::   ||..:|.|.    .:..:|||.|  .:::|             |
Human   100 VVEKSLSPFFSEEFYFEI---PRTFQYLSFYVYDKNVLQRDLRIGKVAIKKEDLCNHSGKETWFS 161

  Fly   719 IAP---NAEHTRRTDNSLKM----------------WVYEAKNLPPKKRYFCELQLDKTLYG--- 761
            :.|   |:|...:....||:                .:.....||......|:.....:|.|   
Human   162 LQPVDSNSEVQGKVHLELKLNELITENGTVCQQLVVHIKACHGLPLINGQSCDPYATVSLVGPSR 226

  Fly   762 ----RTSVKLQTDLLFWGEHFDF------------------PDIPEINVITVNVFREVDKKKKRD 804
                :|.||.:|....:.|.|.|                  .||.::.:       .:|.....:
Human   227 NDQKKTKVKKKTSNPQFNEIFYFEVTRSSSYTRKSQFQVEEEDIEKLEI-------RIDLWNNGN 284

  Fly   805 KYQ--FVGSVKIPVHDVTSRLPCEQWYPILSDKAGDSLGRTSGGGGSGSKDKEQLPTLRIKCRFQ 867
            ..|  |:|.:|:||:.:.:....:.|| :|..:          ..|:.|...:.|.:||:...:.
Human   285 LVQDVFLGEIKVPVNVLRTDSSHQAWY-LLQPR----------DNGNKSSKTDDLGSLRLNICYT 338

  Fly   868 STDILPINVYGNFLTYLKENYKRVCETLEPVIGVKA---------KEDIGQALV-LLMHAQGLAG 922
            ...:||...||...|.|.::     ..::|:....|         |.|....|| ||:|...|. 
Human   339 EDYVLPSEYYGPLKTLLLKS-----PDVQPISASAAYILSEICRDKNDAVLPLVRLLLHHDKLV- 397

  Fly   923 AFLTDVVALDLLRVGDQRLTFRGNSLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDP 987
            .|.|.|..|||....|....||||||||:.::..:|:.|..||:.||...::|:..|.:.||:||
Human   398 PFATAVAELDLKDTQDANTIFRGNSLATRCLDEMMKIVGGHYLKVTLKPILDEICDSSKSCEIDP 462

  Fly   988 TKTSGSSAGSLQRQQAALRGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQLGRQD--MADNL 1050
            .|.  ....:::..:..||..|...:..|.:|....|..:.:.|.:.|:...|....|  :..:.
Human   463 IKL--KEGDNVENNKENLRYYVDKLFNTIVKSSMSCPTVMCDIFYSLRQMATQRFPNDPHVQYSA 525

  Fly  1051 ISASIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQTLANF-----TRFQGKENFM-E 1109
            :|:.:||||...|::||..|::....|.|:..|.|||::||:|||.::     ::...||.|| |
Human   526 VSSFVFLRFFAVAVVSPHTFHLRPHHPDAQTIRTLTLISKTIQTLGSWGSLSKSKSSFKETFMCE 590

  Fly  1110 FLNDFLEQ-EAARMQQFLEIIST 1131
            |...|.|: ....:::||:.||:
Human   591 FFKMFQEEGYIIAVKKFLDEISS 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 31/142 (22%)
PH <656..720 CDD:278594 17/88 (19%)
C2_SynGAP_like 721..874 CDD:175980 35/198 (18%)
RasGAP 856..1185 CDD:214617 89/295 (30%)
RasGAP_DAB2IP 865..1192 CDD:213338 86/286 (30%)
RASA2XP_016862457.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144454
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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