DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and rasa4

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_005172052.1 Gene:rasa4 / 567599 ZFINID:ZDB-GENE-060526-349 Length:806 Species:Danio rerio


Alignment Length:753 Identity:174/753 - (23%)
Similarity:284/753 - (37%) Gaps:212/753 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   657 SHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSCGSRQERDLWI--------- 712
            |..|:....||....:|...:.:.||..:        |:|.           |.|:         
Zfish    69 SFYVLDEDSLSRDDVIGKVSITKEVLSAK--------PQGV-----------DGWMNLTEIDPDE 114

  Fly   713 -----YSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKKRY-----FCELQLDKTLYGRTSVKL 767
                 ..|:.|:..:.:..|:    |...|.||::|..|.|.     |..::.:...| .:||..
Zfish   115 EVQGEIHLQISVLGDGDIPRK----LCCQVLEARDLAKKDRNGASDPFVRVRYNGKTY-ESSVVK 174

  Fly   768 QTDLLFWGEHFDFPDIPEI---NVITVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSRLPCEQWY 829
            ::....|.|.|:| ::.|.   ::::|.|: :.|...:.|   |:|.|...::.:.|.|..|.|:
Zfish   175 KSCYPRWNESFEF-ELDEALTDSLLSVEVW-DWDLVSRND---FLGKVLFNINKLQSALQEEGWF 234

  Fly   830 PILSDKAGDSLGRTSGGGGSGSKDKE---QLPTLRIKCRFQSTDILPINVYGNFLTYLKENYKRV 891
            .:..||               ||..|   .|.:||:..|.:...:||           ..:||.:
Zfish   235 RLGPDK---------------SKHSEYEGTLGSLRLHLRLRDEVVLP-----------SSHYKPL 273

  Fly   892 CETLEPVIG-------------------VKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVG 937
            .|.|...:|                   .::::::...||.|...|||...||..:..|:|.:..
Zfish   274 TELLSQSVGSQLNGNWPDFIMLIDETTTAESRQEVANNLVKLFLGQGLVKEFLDVLFKLELDKTT 338

  Fly   938 DQRLTFRGNSLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAG--SLQR 1000
            :....||.||||:||||:|||:.|.|||...|...||.:.:.::..|:||:|.....||  .|.|
Zfish   339 EPNTLFRSNSLASKSMESFLKVAGMQYLHRLLGPIINRIFEEKKYVELDPSKVELKEAGCAGLHR 403

  Fly  1001 QQ----------AALRGAVRGAWQCIFESHKHFPAQL----RNCFATFRERLQQLGRQDMADNLI 1051
            ||          :.|:..:......|.:|..:.|..:    ...:...:||......:.:....:
Zfish   404 QQTESDVIQQSSSLLQSYLSELLTSILQSASYCPLLICQVFHQLYLRVQERFPDPEYRKVKFIAV 468

  Fly  1052 SASIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQTLANFTRFQ--GKENFMEFLNDF 1114
            ::.:.|||:.|||:||.||::..:...||.:|.|.|:||.:||:.|.....  .||.:|..|...
Zfish   469 TSFLCLRFISPAIMSPKLFHLREKHADARTSRTLLLLAKAVQTIGNMDTLACCSKEPWMVRLQPA 533

  Fly  1115 LEQEAARMQQF------------LEIISTRPE--------------HPAPDSILDWAG-----YI 1148
            ::|...:::.|            || :.||..              |...|..:....     |:
Zfish   534 IQQGITQLKDFITRLVNCHESEDLE-LQTRMSLQCGTMEKEGFLFLHRTKDKCMPMTSPFKKYYV 597

  Fly  1149 DQGKQ-LS---ILHSLLSESLAKLPEARQHE---------------------------------L 1176
            ...|. ||   .|||..|.|:: ||:.|..|                                 :
Zfish   598 TLSKDTLSYSRTLHSKKSSSIS-LPKIRAVEKVEEKCFGSANVMQIISSEDSGQQETLYLDCKSV 661

  Fly  1177 DPLQHILDEISRAKEHGMGTAL---PGGY-LPATSSTHSIASENQENRNPGSSGSHAGSNSE--- 1234
            :.|.|.|..:.:|..|...|..   ||.| ....|..|     .:|..:||...:..|...:   
Zfish   662 NELNHWLSALRKACSHNTNTMSCFHPGIYKADRWSCCH-----QKEKSDPGCDKTRHGVTLQEWY 721

  Fly  1235 ---------QLLPQQSQLAQPQHAIVSK--PLSAERGI 1261
                     ||:.|  .|:..|||:..|  .|..::||
Zfish   722 DPLDPDLEAQLIYQ--HLSSVQHAMRDKYYKLREQQGI 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 14/85 (16%)
PH <656..720 CDD:278594 13/76 (17%)
C2_SynGAP_like 721..874 CDD:175980 38/163 (23%)
RasGAP 856..1185 CDD:214617 105/433 (24%)
RasGAP_DAB2IP 865..1192 CDD:213338 103/431 (24%)
rasa4XP_005172052.1 BTK 685..712 CDD:279161 8/31 (26%)
C2A_Rasal1_RasA4 6..126 CDD:176018 12/75 (16%)
C2B_RasA1_RasA4 135..258 CDD:175991 35/147 (24%)
RasGAP 247..607 CDD:214617 93/371 (25%)
RasGAP 266..552 CDD:295371 78/296 (26%)
PH_CAPRI 545..684 CDD:241523 25/140 (18%)
PH 571..676 CDD:278594 19/105 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577559
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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