DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and rasa1b

DIOPT Version :10

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_001921722.2 Gene:rasa1b / 564822 ZFINID:ZDB-GENE-090311-50 Length:1032 Species:Danio rerio


Alignment Length:808 Identity:197/808 - (24%)
Similarity:324/808 - (40%) Gaps:171/808 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 HQGV--MQGALSISCAGDNSSNNGSWGKHFYQPYDVCPLSLDELNCYFQADQCEKLICERFKIRD 546
            |:|.  ..|.:|...|.:.....|..|....:|.|..|   .:.:.||:..:    ..:||||  
Zfish   329 HEGKAWFHGKISKQEAYNLLMTVGQVGSFLVRPSDSTP---GDYSLYFRTTE----TIQRFKI-- 384

  Fly   547 LAIHMASASAIGADLSVTTENETTA------TADDDAGHHSDTSYEKACRR-----GSAPTTPIL 600
                           |.|..|:...      :.||...|:         ||     |.:....: 
Zfish   385 ---------------SPTPSNQFMMGGRYYNSIDDIIEHY---------RREQIVEGHSLKDAL- 424

  Fly   601 GSKQHQTE-----------HNATSRFTN--FFS---KKSNPL------KRTKSVTKLERTKRGSG 643
             |.|||.:           :|...|.|.  |:.   ||...|      ||.|::..:        
Zfish   425 -SVQHQEQVLTDIVEGKEIYNTIRRKTKDAFYKNIVKKGYILFNKGKGKRWKNLYFI-------- 480

  Fly   644 GLRGSRSH----ESLLSSHAVMSTIDLS-CTGAVGVAPVHQSVLGRRHCFQVRGGPRGER---YY 700
             |.|:.|.    ||...:......|||| |:    |..||.|:.||.:|||:......|.   :|
Zfish   481 -LEGNDSQLIYFESEKRATKPKGLIDLSVCS----VYEVHDSMFGRPNCFQIVVQHFSEEQCIFY 540

  Fly   701 SCGSRQER-DLWI-------YSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPK--KRYFCELQL 755
            ..|...|: :.|:       .:|||.:.|.:....|..:||.:.|.||..||.|  ...:|.:.|
Zfish   541 FAGETPEQAEDWMKCLQTFCNNLRKPVQPCSNKRLRQVSSLFLNVEEAHKLPSKHFTNAYCNIYL 605

  Fly   756 DKTLYGRTSVKLQTDLLFWGEHFDFPDI-PEINVITVNVFREVDKKKKRDKYQFVGSVKIPVHDV 819
            :.....:|..: :.....|.|.|.|.|: .|||...:::..:..|.|:.|    :..:..|:..:
Zfish   606 NSIQVAKTHPR-EGQNPVWTEEFIFDDLSSEINRFEISLSNKTKKSKEND----ILFMCCPLCRL 665

  Fly   820 TSRLPCEQWYPILSDKAGDSLGRTSGGGGSGSKDKEQLP-TLRIKCRFQSTDILPINVYGNF--L 881
            ......::|:|:                .|....|..:| :||::.|:....|:|:.||...  |
Zfish   666 QRGQIIDEWFPL----------------SSHVPLKNVMPSSLRLRVRYSVEKIMPVEVYSELKEL 714

  Fly   882 TYLKENYKRVCETLEPVIGVKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGN 946
            ..|::.:  |...|..|.|.| :..:...|:.:...|......|.::...::....:....||..
Zfish   715 VVLRDLH--VVSALAHVCGQK-RTLLASVLLRIFRHQNQEAQLLRELNDREICAEDEATTLFRAT 776

  Fly   947 SLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQ------AAL 1005
            :||:..||.::|.|...::...|...|.:::.|.:.||::|:|        |::.:      |.|
Zfish   777 TLASTLMEQYMKATATPFVHHALKDSILKIMDSRQSCELNPSK--------LEKNEDVNVNLAHL 833

  Fly  1006 RGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQLGRQD--MADNLISASIFLRFLCPAILSPS 1068
            ...|....:.||.:.:..|..||..:...::.::|...::  |...::|..:|||.:||||::|.
Zfish   834 LSIVSELLEKIFMAAEILPPTLRFIYGCLQKAVEQKWPRNTTMRTRVVSGFVFLRLICPAIVNPR 898

  Fly  1069 LFNITSELPSARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRP 1133
            :|||.::.||..|:|.||||||.:|.|||...|..||.:||.:|.|::....||..||:.:....
Zfish   899 IFNIIADPPSPVASRTLTLVAKAVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMILFLDELGKVS 963

  Fly  1134 EHPAPDSILDWAGYIDQGKQLSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGMGTAL 1198
            |.|.|....:    .|..:.|:.||.|....|.:| ....::....||:|.::....|       
Zfish   964 ELPEPTEHFN----TDVARDLAALHQLCVTHLDEL-RTLSNDRGAQQHVLKKLLAVSE------- 1016

  Fly  1199 PGGYLPATSSTHSIASENQENRNPGSSG 1226
               .|..|...:|           ||||
Zfish  1017 ---LLQQTQGQYS-----------GSSG 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 36/140 (26%)
C2_SynGAP_like 721..874 CDD:175980 34/156 (22%)
RasGAP_DAB2IP 865..1192 CDD:213338 91/336 (27%)
DUF3498 <1927..1997 CDD:463427
rasa1bXP_001921722.2 SH2 148..247 CDD:472789
SH3_RasGAP 264..322 CDD:212722
SH2_Cterm_RasGAP 334..409 CDD:198217 19/98 (19%)
PH_RASA1 456..560 CDD:270080 30/116 (26%)
C2_Ras_p21A1 576..701 CDD:176045 32/145 (22%)
RasGAP_p120GAP 700..1029 CDD:213340 95/365 (26%)
Blue background indicates that the domain is not in the aligned region.

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