DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and Rasal3

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_006241121.1 Gene:Rasal3 / 314596 RGDID:1309019 Length:1038 Species:Rattus norvegicus


Alignment Length:922 Identity:267/922 - (28%)
Similarity:392/922 - (42%) Gaps:142/922 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   581 SDTSYEKACRRGSAPT-TP------ILGSKQHQTEHNATSRFTNFFSKKSNPLKRTKSVTKLERT 638
            |::|.:.|......|. ||      ..||.|   .||...     ..|:....||.||.......
  Rat   187 SESSMQAALGNLKDPVRTPGKIEPEATGSNQ---VHNVRK-----LLKRLKEKKRAKSELGAHTP 243

  Fly   639 KRGSGGLRGSRSHESLLSSHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSCG 703
            :.|.....|||  |||    |.:|.:||.....|.|.|:|.|:||..:||||... .|.|.:||.
  Rat   244 RDGPSSALGSR--ESL----ATLSELDLGVERDVRVWPLHPSLLGEPYCFQVTWA-GGSRCFSCR 301

  Fly   704 SRQERDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLP----PKKRYFCELQLDKTLYGRTS 764
            |..|||.||..||:...|:.::..|.:..|.:||:|||.||    |..|  .||.||..|..||:
  Rat   302 SSAERDRWIEDLRRQFQPSQDNVERQETWLTVWVHEAKGLPRAAAPGVR--AELWLDGALLARTA 364

  Fly   765 VKLQTDLLFWGEHFDFPDIPEINVITVNVFREVDKKKKRDKYQFVGSVKIPVHDVT-SRLPC--- 825
            .:...|.|||.|.|.|..:|....:::.:      :........||.|.:.:.:|: .|.|.   
  Rat   365 PRAGPDQLFWAERFHFEALPPARRLSLRL------RGAGPAGATVGRVVLELDEVSIPRAPAAGL 423

  Fly   826 EQWYPILSDKAGDSLGRTSGGGGSGSKDKEQLPTLRIKCRFQSTDILPINVYGNFLTYLKENYKR 890
            |:|:|:|...||                    ..||.:.|.:...:||...|.....:|..:|.|
  Rat   424 ERWFPVLGAPAG--------------------AVLRARIRVRCLRVLPSERYKELAEFLTFHYAR 468

  Fly   891 VCETLEPVIGVKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGD-QRLTFRGNSLATKSME 954
            :|..|||.:..:|||::..|:|.::.|.|.|.|.:||:...:|.|.|. :.|.||.|:||||:::
  Rat   469 LCMALEPALSAQAKEELAAAMVRVLRATGRAQALVTDLGTAELERCGGREALLFRENTLATKAID 533

  Fly   955 AFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAALRGAVRGAWQCIFES 1019
            .::||..::|||:||...:..|..|..||||||:|   .....|.:.||.||.:....::.|..|
  Rat   534 EYMKLVAQEYLQETLGQVVRSLCASTEDCEVDPSK---CPTPELPKCQARLRSSCEEVFENIIHS 595

  Fly  1020 HKHFPAQLRNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSLFNITSELPSARATRN 1084
            :.:|||:|...|:.:||..:..|.:.:...|:.||:|||.||||||:||||.:..|.|:....|.
  Rat   596 YNYFPAELGTVFSNWREACKARGSEALGPRLVCASLFLRLLCPAILAPSLFGLAPEHPAPGPART 660

  Fly  1085 LTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPEHPAPDSILDWAGYID 1149
            |||:||.:|.|||...|..||.:|.|:|.|||.....|:.||:.::.......|..   :.|..|
  Rat   661 LTLIAKVIQNLANCAPFGEKEAYMVFMNSFLEDHGPAMRHFLDQVAMVDTDTTPSG---YQGSGD 722

  Fly  1150 QGKQLSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGMGTAL---------------- 1198
            ...||::||..|....|:|.:..:..|:||..||..|...:...:...:                
  Rat   723 LALQLAVLHVQLCTIFAELDQKTRDSLEPLPTILQAIEEGRPVPVSVPMRLPLNTAHVQSSFSSG 787

  Fly  1199 --PGGYLPATSSTHS-IASENQENRNPGSSGSHAGSNSEQLLPQ---------QSQLA-QPQH-- 1248
              ||...|.....|: :.|::|..|:...:||.|....:...||         ||..| :|.|  
  Rat   788 EKPGFLAPRDLPKHTPLISKSQSLRSFQGAGSWARRRPDGERPQRRPRPVLRTQSVPARRPTHHR 852

  Fly  1249 -AIVSKPLSAERGIMRGVLTPNSLEKNIFRYNDPTVNGLLQQQQQQQQQQQQQQQQHQQLQQHGH 1312
             |..|||  ..:|.:|               ..|..:|....:......::......:||.|.|.
  Rat   853 PAAGSKP--RPKGSLR---------------TGPATSGRAWARTSTSLPRKPSVPWQRQLDQPGD 900

  Fly  1313 Q-QQPHHQHPLQMLSNSQTSIAGNQYMSSPGGLQHAQSQTSMASSSLNGSSSNLLHGHQQHAHHP 1376
            : |.|....|:..|:..|..:|         .|:..|...|....||:.....|....:|.....
  Rat   901 RYQTPGTHRPVGKLAEIQCEVA---------ALREEQKALSHLVESLSTHIQALTEQQEQLRCQL 956

  Fly  1377 QQLHPHHCPPAPQTSASSTMERMDRMNYPYMSHNGNDYETS----------------TPSSTRSR 1425
            |.|.........:..:...:.....:....:.|...:.|.|                ||.| ||:
  Rat   957 QDLDSRLGAGISKLDSKGGLPSNGSLGLKSLEHRMTEMECSQNQLRDTLQSLQLLSKTPGS-RSQ 1020

  Fly  1426 TLPRNGNPNANG 1437
            ..|... |..||
  Rat  1021 PPPLKA-PCVNG 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 40/113 (35%)
PH <656..720 CDD:278594 27/63 (43%)
C2_SynGAP_like 721..874 CDD:175980 43/160 (27%)
RasGAP 856..1185 CDD:214617 121/329 (37%)
RasGAP_DAB2IP 865..1192 CDD:213338 120/327 (37%)
Rasal3XP_006241121.1 PH-like 200..346 CDD:302622 57/160 (36%)
C2 319..451 CDD:301316 42/159 (26%)
RasGAP_DAB2IP 443..766 CDD:213338 120/328 (37%)
Rep_3 <775..882 CDD:302843 25/123 (20%)
TMF_DNA_bd 913..973 CDD:289127 12/68 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338162
Domainoid 1 1.000 97 1.000 Domainoid score I7057
eggNOG 1 0.900 - - E1_KOG3508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D44624at33208
OrthoFinder 1 1.000 - - FOG0000844
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10194
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X495
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.850

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