DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and Rasa3

DIOPT Version :10

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:NP_113762.1 Gene:Rasa3 / 29372 RGDID:69365 Length:834 Species:Rattus norvegicus


Alignment Length:776 Identity:171/776 - (22%)
Similarity:294/776 - (37%) Gaps:187/776 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   697 ERYYSCGSRQERDLWI--------------YSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKK 747
            :||::      ||.|.              ..|...::.....|....:.|...::|.:.||...
  Rat   103 QRYHN------RDTWFQLQHVDADSEVQGKVHLELRLSEVITDTGVVCHKLAARIFECQGLPIVN 161

  Fly   748 RYFCELQLDKTLYG-------RTSVKLQT-----DLLFWGE-----------HFDFPDIPEINVI 789
            .. |:.....||.|       :|.||.:|     |.:|:.|           ||||.:       
  Rat   162 GQ-CDPYATVTLAGPFRSEAKKTKVKKKTNNPQFDEVFYFEVTRPCSYSKKSHFDFEE------- 218

  Fly   790 TVNVFREVDKKKKR-DKY---------QFVGSVKIPVHDVTSRLPCEQWYPILSDKAGDSLGRTS 844
                 .:|||.:.| |.:         :|:|.::||:|.:......|.|| .|..:         
  Rat   219 -----EDVDKLEIRVDLWNASNLKFGDEFLGELRIPLHVLRYASSYEAWY-FLQPR--------- 268

  Fly   845 GGGGSGSKDKEQLPTLRIKCRFQSTDILPINVYGNFLTYLKENYKRVCETLEPVIGVKA------ 903
             ..||.|...:.|.:||:...:....:.....|......|.::     ..:|||....|      
  Rat   269 -DNGSKSVKPDDLGSLRLNVVYTEDHVFSSEYYSPLRDLLLKS-----ADVEPVSASAAHILGEV 327

  Fly   904 ---KEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSMEAFLKLTGEQYL 965
               |::....||.|:...|....|::.:.:.::.|..|....||||||.:|.::..:||.|..||
  Rat   328 CRDKQEAAIPLVRLLLHYGRVVPFISAIASAEVKRTQDPNTIFRGNSLTSKCIDETMKLAGMHYL 392

  Fly   966 QDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAALRGAVRGAWQCIFESHKHFPAQLRNC 1030
            ..||...|.|:.||.:.||:||.|.....  :|:....:||..|...:..|.:|....|..:.:.
  Rat   393 HVTLKPTIEEICQSHKSCEIDPVKLKDGE--NLENNMESLRQYVDRIFSVITKSGVSCPTVMCDI 455

  Fly  1031 FATFRERLQQLGRQDM--ADNLISASIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQ 1093
            |.:.||...:..:.|:  ....:|:.|||||..||||||:||.:|......:.:|.|||::||:|
  Rat   456 FFSLREAAAKRFQDDLDVRYTAVSSFIFLRFFAPAILSPNLFQLTPHHTDPQTSRTLTLISKTIQ 520

  Fly  1094 TLANFTRFQG---KENFM----EFLNDFLEQEAARMQQFLEIIST---RPEHPAPDSILDWAGYI 1148
            ||.:.::.:.   ||::|    ||.|:  ::.|..::.||::||:   |........||...|::
  Rat   521 TLGSLSKSKSASFKESYMATFYEFFNE--QKYADAVKNFLDLISSSGRRDPKSIEQPILLKEGFM 583

  Fly  1149 ---DQGK------------------QLSILHSLLSESLAKLP-------EARQHELDPLQH---- 1181
               .||:                  :.:...|...:.|..:|       |..:.|...:::    
  Rat   584 IKRAQGRKRFGMKNFKKRWFRLTNHEFTYQKSKGDQPLCNIPIENILAVERLEEESFRMKNMFQV 648

  Fly  1182 ----------------------ILDEISRAKEHGMGTALPGGYLPATSSTHSIASENQENRNPGS 1224
                                  ||.::|:..:..:....|..||.........:|:......|.:
  Rat   649 IQPERALYIQANNCVEAKDWIDILTKVSQCNQKRLTVFHPSAYLNGHWLCCRASSDTAIGCTPCT 713

  Fly  1225 SGSHAG--------SNSEQLLP----QQSQLAQPQHAIVSKPLSAERGIMRGVLTPNSLEKNIFR 1277
            .|..|.        ..:|::..    ...:|.:.|.|..||      .:..|   |...|.:.|.
  Rat   714 GGLPANIQLDIDGDRETERIYSLFNLYMGKLEKMQEACGSK------SVYDG---PEQEEYSTFI 769

  Fly  1278 YNDP-----TVNGLLQQQQQQQQQQQQQQQQHQQLQQHGHQQQPHHQHPLQMLSNSQTSIA 1333
            .:||     |:..::......:|:..|.::...:..::|.|:.|......|.....|:.|:
  Rat   770 IDDPQETYRTLKQVIAGVGTLEQEHAQYRRNKFKKTRYGSQEHPIGDKSFQNYIRQQSEIS 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 7/45 (16%)
C2_SynGAP_like 721..874 CDD:175980 40/185 (22%)
RasGAP_DAB2IP 865..1192 CDD:213338 97/401 (24%)
DUF3498 <1927..1997 CDD:463427
Rasa3NP_113762.1 C2A_RasA2_RasA3 13..133 CDD:176046 6/35 (17%)
C2B_RasA3 146..288 CDD:175977 39/165 (24%)
RasGAP_RASA3 297..565 CDD:213336 83/276 (30%)
PH_GAP1_mammal-like 562..686 CDD:241522 15/123 (12%)
BTK 679..714 CDD:128417 5/34 (15%)
Blue background indicates that the domain is not in the aligned region.

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