DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and Rasa1

DIOPT Version :10

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:NP_037267.2 Gene:Rasa1 / 25676 RGDID:3537 Length:1038 Species:Rattus norvegicus


Alignment Length:645 Identity:172/645 - (26%)
Similarity:276/645 - (42%) Gaps:95/645 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   591 RGSAPTTPILGSKQHQTEHNAT-SRFTNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSH--- 651
            :|......:.|.:.:.|....| ..|.....||...||:.|.    :|.|.....|.||.:.   
  Rat   437 QGQVLNDTVDGKEIYNTIRRKTKDAFYKNIVKKGYLLKKGKG----KRWKNLYFILEGSDAQLIY 497

  Fly   652 -ESLLSSHAVMSTIDLS-CTGAVGVAPVHQSVLGRRHCFQVRGGPRGER---YYSCGSRQER-DL 710
             ||...:......|||| |:    |..||.|:.||.:|||:......|.   :|..|...|: :.
  Rat   498 FESEKRATKPKGLIDLSVCS----VYVVHDSLFGRPNCFQIVVQHFSEEHYIFYFAGETPEQAED 558

  Fly   711 WI------YSLRKSIAPNAEHTR-RTDNSLKMWVYEAKNLPPK--KRYFCELQLDKTLYGRTSVK 766
            |:      .||||| :|...:.| |..:||.:.:.||..||.|  ...:|.:.|:.....:|..:
  Rat   559 WMKGLQAFCSLRKS-SPGTSNKRLRQVSSLVLHIEEAHKLPVKHFTNPYCNIYLNSVQVAKTHAR 622

  Fly   767 LQTDLLFWGEHFDFPDI-PEINVITVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSRLPCEQWY- 829
             :.....|.|.|.|.|: |:||...:.:..:..|.|..|    :..::..:..:......::|: 
  Rat   623 -EGQNPVWSEEFVFDDLPPDINRFEITLSNKTKKSKDPD----ILFMRCQLSRLQKGHATDEWFL 682

  Fly   830 -----PILSDKAGDSLGRTSGGGGSGSKDKEQLPTLRIKCRFQSTDILPINVYGNFLTYLKENYK 889
                 |:...:.|                     :||::.|:....|:|...|..|...:.:...
  Rat   683 LSSHIPLKGIEPG---------------------SLRVRARYSMEKIMPEEEYSEFKELILQKEL 726

  Fly   890 RVCETLEPVIGVKAKEDIGQALVLLMHAQGLAGAFLTD-VVALDLLRVGDQRLT--------FRG 945
            .|...|..|        .||...||  |..|...||.: :.:|.|..:.|:.::        ||.
  Rat   727 HVVYALSHV--------CGQDRTLL--ASILLKIFLHEKLESLLLCTLNDREISMEDEATTLFRA 781

  Fly   946 NSLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAALRGAVR 1010
            .:||:..||.::|.|..|::...|...|.::::|::.||:.|:|...:.  .:....|.|...:.
  Rat   782 TTLASTLMEQYMKATATQFVHHALKDSILKIMESKQSCELSPSKLEKNE--DVNTNLAHLLSILS 844

  Fly  1011 GAWQCIFESHKHFPAQLRNCFATFRERLQQL--GRQDMADNLISASIFLRFLCPAILSPSLFNIT 1073
            ...:.||.:.:..|..||..:...::.:|..  ....|...::|..:|||.:|||||:|.:|||.
  Rat   845 ELVEKIFMASEILPPTLRYIYGCLQKSVQHKWPTNNTMRTRVVSGFVFLRLICPAILNPRMFNII 909

  Fly  1074 SELPSARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPEHPAP 1138
            |:.||..|.|.||||||::|.|||...|..||.:||.:|.|::....||..||:.:...||  .|
  Rat   910 SDSPSPIAARTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPE--LP 972

  Fly  1139 DSILDWAGYIDQGKQLSILHSLL---SESLAKLPEAR---QHELDPLQHILDEISRAKEH 1192
            |:...  ...|..:.|:.||.:.   |:.|..|...|   ||.|..|..| .|:.:.|::
  Rat   973 DTTEH--SRTDLSRDLAALHEICVAHSDELRTLSNERGVQQHVLKKLLAI-TELLQQKQN 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 39/129 (30%)
C2_SynGAP_like 721..874 CDD:175980 31/162 (19%)
RasGAP_DAB2IP 865..1192 CDD:213338 102/343 (30%)
DUF3498 <1927..1997 CDD:463427
Rasa1NP_037267.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..152
SH2_Nterm_RasGAP 152..255 CDD:198216
SH3_RasGAP 272..330 CDD:212722
SH2_Cterm_RasGAP 341..417 CDD:198217
PH_RASA1 480..567 CDD:270080 26/90 (29%)
C2_Ras_p21A1 582..707 CDD:176045 28/150 (19%)
RasGAP_p120GAP 705..1036 CDD:213340 101/342 (30%)
Blue background indicates that the domain is not in the aligned region.

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