DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and Rasa2

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_038936819.1 Gene:Rasa2 / 25597 RGDID:3538 Length:880 Species:Rattus norvegicus


Alignment Length:495 Identity:119/495 - (24%)
Similarity:203/495 - (41%) Gaps:100/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 SRQERDLWIYSLRKSIAPNAEHTRRTDNSLKM----------------WVYEAKNLPPKKRYFCE 752
            |...::.| :|| :.|..|:|...:....||:                .:.....||......|:
  Rat   162 SHSGKETW-FSL-QPIDSNSEVQGKVHLELKLNELITENGTVCQQLVVHIKACHGLPLINGQSCD 224

  Fly   753 LQLDKTLYG-------RTSVKLQTDLLFWGEHFDF------------------PDIPEINVITVN 792
            .....:|.|       :|.||.:|....:.|.|.|                  .||.::.:    
  Rat   225 PYATVSLVGPSRNDQKKTKVKKKTSNPQFNEVFYFEVTRSSSYTRKSQFQVEEEDIEKLEI---- 285

  Fly   793 VFREVDKKKKRDKYQ--FVGSVKIPVHDVTSRLPCEQWYPILSDKAGDSLGRTSGGGGSGSKDKE 855
               .:|.....:..|  |:|.:|:||:.:.:....:.|| :|..:          ..|:.|...:
  Rat   286 ---RIDLWNNENLVQDVFLGEIKVPVNVLRNDSSHQAWY-LLQPR----------DNGNKSSKPD 336

  Fly   856 QLPTLRIKCRFQSTDILPINVYGNFLTYLKENYKRVCETLEPVIGVKA----------KEDIGQA 910
            .|.:|.:...:....:||...||.....|.::     ..::||....|          |:.:...
  Rat   337 DLGSLLLTLCYTEDYVLPSEYYGPLKALLLKS-----PDVQPVSASAAYILGEICRDQKDAVLPL 396

  Fly   911 LVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSMEAFLKLTGEQYLQDTLSAPINE 975
            :.||:|...|. .|:|.|..|||....|....||||||||:.:...:|:.|..||:.||...::|
  Rat   397 VRLLLHHNKLV-PFITAVADLDLKDTQDANAIFRGNSLATQCLTEMMKIVGGHYLKVTLKPVLDE 460

  Fly   976 LIQSERDCEVDPTKTSGSSAGSLQRQQAALRGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQ 1040
            :.:|.:.||:||.|.  ....:::..:..|...|...:..|..|....|..:.:.|.:    |:|
  Rat   461 ICESSKSCEIDPVKL--KEGDNVESNKENLYYYVDKVFSAIVGSSVSCPTVMCDIFYS----LRQ 519

  Fly  1041 LGRQDMADN------LISASIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQTLANF- 1098
            :..:...:|      .:|:.:||||...|||||..|::....|..:..|.|||::||:|.:.|: 
  Rat   520 MAAKRFPNNPHVQYSAVSSFVFLRFFAVAILSPHAFHLRPHYPDTQTVRTLTLISKTIQIIGNWG 584

  Fly  1099 ------TRFQGKENFMEFLNDFLEQE-AARMQQFLEIIST 1131
                  :||: |....|||..|.|:. ...:::||:.||:
  Rat   585 CQSRRKSRFK-KSVMCEFLKMFQEERYFTDVKKFLDEISS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 7/24 (29%)
PH <656..720 CDD:278594 4/15 (27%)
C2_SynGAP_like 721..874 CDD:175980 33/195 (17%)
RasGAP 856..1185 CDD:214617 84/300 (28%)
RasGAP_DAB2IP 865..1192 CDD:213338 82/291 (28%)
Rasa2XP_038936819.1 C2A_RasA2_RasA3 78..191 CDD:176046 8/30 (27%)
C2B_RasA3 204..346 CDD:175977 28/159 (18%)
RasGAP 355..625 CDD:413381 80/282 (28%)
PH_GAP1m_mammal-like 622..754 CDD:241521 1/2 (50%)
BTK 739..774 CDD:128417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338164
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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