DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and Rasa2

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_006510838.1 Gene:Rasa2 / 114713 MGIID:2149960 Length:884 Species:Mus musculus


Alignment Length:579 Identity:132/579 - (22%)
Similarity:228/579 - (39%) Gaps:124/579 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   602 SKQHQTEHNATSRFTNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHESLLSSHAVMSTIDL 666
            |::...|...|.::.:|:....|.|:|...:.|:...|..             |.||:...|   
Mouse   124 SEEFYFEIPRTFQYLSFYVYDKNVLQRDLRIGKVAIKKED-------------LCSHSGKET--- 172

  Fly   667 SCTGAVGVAPV--HQSVLGRRHCFQVRGGPRGERYYSCGSRQERDLWIYSLRKSIAPNAEHTRRT 729
                ...:.|:  :..|.|:.| .::|                       |.:.|..|....:: 
Mouse   173 ----WFSLQPIDSNSEVQGKVH-LELR-----------------------LNELITENGTVCQQ- 208

  Fly   730 DNSLKMWVYEAKNLPPKKRYFCELQLDKTLYG-------RTSVKLQTDLLFWGEHFDF------- 780
               |.:.:.....||......|:.....:|.|       :|.||.:|....:.|.|.|       
Mouse   209 ---LVVHIKACHGLPLINGQSCDPYATVSLVGPSRNDQKKTKVKKKTSNPQFNEVFYFEVTRSSS 270

  Fly   781 -----------PDIPEINVITVNVFREVDKKKKRDKYQ--FVGSVKIPVHDVTSRLPCEQWYPIL 832
                       .||.::.:       .:|.....:..|  |:|.:|:||:.:.|....:.|| :|
Mouse   271 YSRKSQFQVEEEDIEKLEI-------RIDLWNNENLVQDVFLGEIKVPVNVLRSDSFHQAWY-LL 327

  Fly   833 SDKAGDSLGRTSGGGGSGSKDKEQLPTLRIKCRFQSTDILPINVYGNFLTYLKENYKRVCETLEP 897
            ..:          ..|:.|...:.|.:|.:...:....:||...||...|.|.::     ..::|
Mouse   328 QPR----------DNGNKSSKTDDLGSLLLTLCYTEDCVLPSEYYGPLKTLLLKS-----PDVQP 377

  Fly   898 VIGVKA----------KEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKS 952
            |....|          |:.:...:.||:|...|. .|:|.|..|||....|....||||||||:.
Mouse   378 VSASAAYILGEICQDQKDAVLPLVRLLLHHNKLV-PFITAVAELDLKDTPDANAIFRGNSLATQC 441

  Fly   953 MEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAALRGAVRGAWQCIF 1017
            :...:|:.|..||:.||...::|:.:|.:.||:||.|.  ....:::..:..|...|...:..|.
Mouse   442 LTEMMKIVGGHYLKVTLKPVLDEICESSKSCEIDPVKL--KEGDNVENNKENLYYYVDKVFNTIV 504

  Fly  1018 ESHKHFPAQLRNCFATFRERLQQL--GRQDMADNLISASIFLRFLCPAILSPSLFNITSELPSAR 1080
            .|....|..:.:.|.:.|:...:.  ....:..:.:|:.:||||...|||||..|::....|..:
Mouse   505 GSSVSCPTVMCDIFYSLRQMAAKKFPNHPHVQYSAVSSFVFLRFFAVAILSPHAFHLRPHYPDTQ 569

  Fly  1081 ATRNLTLVAKTLQTLANF-------TRFQGKENFMEFLNDFLEQE-AARMQQFLEIIST 1131
            ..|.|||::||:|.:.|:       :||: |....|||..|.|:. ...:::||:.||:
Mouse   570 TVRTLTLISKTIQIIGNWGCQSRKKSRFK-KSVMCEFLKMFQEERYFTDVKKFLDEISS 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 18/115 (16%)
PH <656..720 CDD:278594 9/65 (14%)
C2_SynGAP_like 721..874 CDD:175980 32/179 (18%)
RasGAP 856..1185 CDD:214617 83/296 (28%)
RasGAP_DAB2IP 865..1192 CDD:213338 81/287 (28%)
Rasa2XP_006510838.1 C2A_RasA2_RasA3 82..195 CDD:176046 18/114 (16%)
C2B_RasA3 208..350 CDD:175977 30/163 (18%)
RasGAP 359..629 CDD:383031 79/278 (28%)
PH_GAP1m_mammal-like 626..758 CDD:241521 1/2 (50%)
BTK 743..778 CDD:128417
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834584
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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