DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and rasal2

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_004914087.1 Gene:rasal2 / 100379974 XenbaseID:XB-GENE-5795955 Length:1279 Species:Xenopus tropicalis


Alignment Length:1615 Identity:428/1615 - (26%)
Similarity:675/1615 - (41%) Gaps:471/1615 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   492 LSISCAGDNSSNNGSWGKHFYQPYDVCPLSLDE-------LNCYFQADQCEKLICER-FKIRDLA 548
            :.:|..||:.::    |..|:|..|..|..||.       |:.......|::....| :.::...
 Frog     4 MDLSPGGDSVTS----GHDFFQDRDSLPEDLDSPGGVGGILDRILMESVCQQQGWVRVYDVKGPP 64

  Fly   549 IHMASASAIGADLSVT--------TENETTATADDD--AGHHS-----DTSYEKACRR------- 591
            .|..|........|.|        ||::......||  .|..:     ::|..::.||       
 Frog    65 THRLSCGQSPYTESTTWERKYCILTESQLVLLNRDDEMPGETAQDPPPESSKSRSLRRTVSVPSE 129

  Fly   592 GSAPTTPILGS-----------KQHQTEHNATSRFTN--------------FFSKK-SNPLKRTK 630
            |..|..|..|:           ::......:||..||              ||||: ...:||||
 Frog   130 GQFPDYPPEGAAKLEVPAERSPRRRSISGTSTSDKTNAMDPANTSPFKVSGFFSKRLKGSIKRTK 194

  Fly   631 SVTKLERT---------------KRGSGGLRGSRSHESLLSSHAVMSTIDLSCTGAVGVAPVHQS 680
            |.:||:|.               .||...|:.|||||||||..:.:..:||.....:.|.|:|.|
 Frog   195 SQSKLDRNTSFRLPSLRPAESDRSRGLPKLKESRSHESLLSPGSAVEALDLGTEDKILVKPLHSS 259

  Fly   681 VLGRRHCFQVRGGPRGERYYSCGSRQERDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPP 745
            :||:..||:|... .|.:.:||.|..|||.|:.:||:::.||.::.||.:|.|::|:.|||:|.|
 Frog   260 ILGQDFCFEVTYS-SGSKCFSCSSAAERDKWMENLRRTVQPNKDNCRRAENVLRLWIIEAKDLAP 323

  Fly   746 KKRYFCELQLDKTLYGRTSVKLQTDLLFWGEHFDFPDIPEINVITVNVFREVDKKKKRDKYQFVG 810
            ||:|||||.||.||:.||:.|.:.|.:||||:|:|..:|.::.|||:::::|:||||:||..:||
 Frog   324 KKKYFCELCLDDTLFARTTSKTKADNIFWGEYFEFYGLPPLHNITVHIYKDVEKKKKKDKNNYVG 388

  Fly   811 SVKIPVHDVTSRLPCEQWYPILSDKAGDSLGRTSGGGGSGSKDKEQLPTLRIKCRFQSTDILPIN 875
            .|.||:..||.|...|:|||:.:..|  :.|:|.|            |::|||.|:|:..|||:.
 Frog   389 LVNIPMISVTGRQFVEKWYPVSTPTA--NKGKTVG------------PSIRIKSRYQTITILPME 439

  Fly   876 VYGNFLTYLKENYKRVCETLEPVIGVKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQR 940
            .|..|..::..||..:|..|||||.|:.||::..|||.::.:.|.|..||||:|..::.|.|:..
 Frog   440 QYKEFAEFITINYTMLCSVLEPVISVRNKEEMACALVHILQSTGRAKDFLTDLVMSEVDRCGEHD 504

  Fly   941 -LTFRGNSLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAA 1004
             |.||.|:||||::|.:|||.|::||.|.|...|..|.:|:.:|||||:|.|.|   .|...|:.
 Frog   505 VLIFRENTLATKAIEEYLKLVGQKYLHDALGEFIKALYESDENCEVDPSKCSSS---ELSDHQSN 566

  Fly  1005 LRGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSL 1069
            |:.....|:..|..|:..||.:|:..||:::::....|:||:::.|||||:|||||||||:||||
 Frog   567 LKMCCELAFCKIINSYCVFPRELKEVFASWKQQCINRGKQDISERLISASLFLRFLCPAIMSPSL 631

  Fly  1070 FNITSELPSARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPE 1134
            |.:..|.|..|.:|.|||:||.:|.||||.:|..||.:|.|:|||||.|...|::||:.||.   
 Frog   632 FGLMQEYPDDRTSRTLTLIAKVIQNLANFAKFGNKEEYMAFMNDFLEHEWGGMKRFLQEISN--- 693

  Fly  1135 HPAPDSILD---WAGYIDQGKQLSILHSLLSESLAKLP-------EARQHELDPLQHILDEISRA 1189
               ||:|.:   :.||||.|::||:|||||.|.:::|.       :|...:|.||..||.:|:::
 Frog   694 ---PDTISNTPGFEGYIDLGRELSVLHSLLWEVVSQLDKGENSFLQATVEKLGPLPRILADITKS 755

  Fly  1190 KEHGMGTALPGGYLPATSSTHSIASENQENRNPGSSGSHAGSNSEQLL--PQQSQLAQPQHAIVS 1252
            ..:            .|.....:...::.:..|..||| ..|..:::.  |..|.|.:.:...:.
 Frog   756 LTN------------PTPIQQQLRRFSEHSSTPNVSGS-LSSGLQKIFEDPADSDLQRFRSPTIE 807

  Fly  1253 KPLSAERGIMRGVLTPNSLEKNIFRYNDPTVNGLLQQQQQQQQQQQQQQQQHQQLQQHGHQQQPH 1317
            .|.|..||            |.:          ||.||...|......:.:.:.:..:|....  
 Frog   808 NPESYFRG------------KTL----------LLVQQASTQSMSFSDKDERENVLPNGRSVS-- 848

  Fly  1318 HQHPLQMLSNSQTSIAGNQYMSSPGGLQHAQSQTSMASSSLNGSSSNLLHGHQQHAHHPQQLHPH 1382
                |..|.:|..|......:.....|:...||.|:|..:   :...|...|......||...|.
 Frog   849 ----LMDLQDSNVSHTDRSSVIQEPPLRLTGSQLSIAHVA---TIKQLRENHSMPQSAPQVRKPL 906

  Fly  1383 HCPPAPQTSASSTMERMDRMNYPYMSHNGNDYETSTPSSTRSRTLPRNGNPNANGNVG-SSNNNQ 1446
            |    |..|..|:::.:...|..|..:|        |..    |:|:....::..|:. :|:.:|
 Frog   907 H----PALSQQSSLQPLSFQNPVYHLNN--------PPP----TMPKASVDSSLENLSTASSRSQ 955

  Fly  1447 SGSYDDMHGEFQIQISGFDTSSAFVCKSPTPMMKSSLGPAGAGRSHHKLNLGIPDHSGGYVRGNN 1511
            |.|.:                  |:...|:                   |..:.|.:....:..:
 Frog   956 SNSEE------------------FILSGPS-------------------NSSMEDFTKRSTQSED 983

  Fly  1512 LNPNSNMPKNLEDLDDLFKYAEEHDVAEPANHHNHNQGQQNHQGHLKPAAVP-----GKEQLSAK 1571
            ......||:                  .|.                 |.|:|     |:.|: .|
 Frog   984 FTRRHTMPE------------------RPI-----------------PIALPRQNSTGQAQI-RK 1012

  Fly  1572 SSHCSSGYQSISTNPSPSQSSSPVESQLKAA---MGSHNAPLAFKNPSYQLQPQTGSSRSSAQSN 1633
            :...:.|.:      :.:..|.|..:.|::|   .|..|..|        ::|....:||..||.
 Frog  1013 TDQAALGAR------AKAPQSLPHSASLRSAGSMSGISNNML--------VEPVQNGNRSRQQST 1063

  Fly  1634 T------------HQQQQQQQQQQFGS-RLKPIGGGLVAARAAFLNSGGALEAATLTPSSSDEQL 1685
            :            |:||.||.|....| .:.|     |...||::.:.|..|         ||:.
 Frog  1064 SSRESPVPKLRAIHRQQTQQVQSPVDSATMSP-----VERTAAWVLNNGQYE---------DEEE 1114

  Fly  1686 SADNYFSYAAAAAAGAGIATKLEAQRSLSGGSSSSTSASASTSNLGKSGGSSAYGRLNGPLKRED 1750
            :.|                                                              
 Frog  1115 TVD-------------------------------------------------------------- 1117

  Fly  1751 VYGSGYGGSSGNVGYGLSTSSAAGHHQHPHQQQQNPMQQQQQRERDQEHKQYAGSVAGSVGSATS 1815
                                                    |.::..:..::|...:|        
 Frog  1118 ----------------------------------------QNKDESKPAEKYEQEIA-------- 1134

  Fly  1816 AAQRRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQLRSSGGSGGGGAGSEQGLGKSYDQNGEIQ 1880
            ..:.||.:.|.|               |:|.:||..::.                         |
 Frog  1135 KLKERLKISSRR---------------LEEYERRLLVQE-------------------------Q 1159

  Fly  1881 LLQQTLDTLCHTLDRDEAELRDSSDELFGLQRPAGSNGSNNLSLQSESTMRSIIDSFFQSSCRLI 1945
            .:|:.|......|:..|..||...:|                   .:|.|:|:|.       |||
 Frog  1160 QMQKLLMEYKSRLEDSEERLRRQQEE-------------------KDSQMKSVIS-------RLI 1198

  Fly  1946 TMEEELRREQLKMSLALSHKQRVIEEQGQQIAALDAANSRLLSALTALRQRYETQ 2000
            .:||||:::..:|...:..||::|:.|.::|.:|||||:||:||||.:::||.:|
 Frog  1199 AVEEELKKDHAEMQAVIDAKQKIIDAQEKRIISLDAANTRLMSALTQVKERYNSQ 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 50/143 (35%)
PH <656..720 CDD:278594 22/63 (35%)
C2_SynGAP_like 721..874 CDD:175980 68/152 (45%)
RasGAP 856..1185 CDD:214617 148/339 (44%)
RasGAP_DAB2IP 865..1192 CDD:213338 145/337 (43%)
rasal2XP_004914087.1 PH-like 173..357 CDD:388408 76/184 (41%)
C2_SynGAP_like 299..438 CDD:175980 68/152 (45%)
RasGAP_DAB2IP 429..759 CDD:213338 145/350 (41%)
DUF3498 749..1241 CDD:371844 136/828 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5143
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 551 1.000 Inparanoid score I1112
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D44624at33208
OrthoFinder 1 1.000 - - FOG0000844
OrthoInspector 1 1.000 - - otm47902
Panther 1 1.100 - - LDO PTHR10194
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X495
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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