DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and rasa3

DIOPT Version :10

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_009303503.1 Gene:rasa3 / 100318936 ZFINID:ZDB-GENE-090313-21 Length:853 Species:Danio rerio


Alignment Length:968 Identity:193/968 - (19%)
Similarity:323/968 - (33%) Gaps:314/968 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 CPLSLDELNCYFQADQCEKLIC----ERF------KIRDLAIHMASASAIGADLSVTTENETTAT 572
            |.::||:.. .|:....||.:|    |.|      ..|.|:.::........|.|:   .:....
Zfish    38 CTVNLDQEE-VFRTKTIEKSLCPFYGEDFYCEIPRSFRHLSFYIFDRDVFRRDSSI---GKVAVK 98

  Fly   573 ADDDAGHHSDTSYEKACRRGSAPTTPILGSKQHQTEHNATSRFTNFFSKKSNPLKRTKSVTKLER 637
            .:|...:|....:        .|..|:....:.|             .|....|:.::.:|    
Zfish    99 KEDLQKYHGKDHW--------FPLQPVCADSEVQ-------------GKVHLELRLSELIT---- 138

  Fly   638 TKRGSGGLRGSRSHESLLSSHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSC 702
               .||||    .|:        ::|..|.|..    .|:            |.|        .|
Zfish   139 ---DSGGL----CHK--------LATRVLECQD----LPI------------VNG--------QC 164

  Fly   703 GSRQERDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKKRYFCELQLDKTLYGRTSVKL 767
            ..        |:....:.|:....::|.       .:.||..|        |.|:..:    .::
Zfish   165 DP--------YAAVSLLGPSRSEAKKTK-------VKRKNNNP--------QFDEIFF----FEV 202

  Fly   768 QTDLLFWGEHFDFPDIPEINVITVNVFREVDK-KKKRDKY---------QFVGSVKIP------- 815
            ...|.|....||..:            .:||| ..|.|.:         :|:|.|::|       
Zfish   203 TKPLSFTKRQFDVEE------------DDVDKLALKVDLWNASNLKFGDEFLGEVRVPLKVLGQA 255

  Fly   816 -VHDVTSRLPCEQWYPILSDKAGDSLGRTSGGGGSGSKDKEQLPTLRIKCRFQSTDILPINVYGN 879
             |||.        || .|..:          ..|..|...::|.:||:...:....:.|...|..
Zfish   256 GVHDA--------WY-FLQPR----------DNGHKSVKADELGSLRLNIVYTEDHVFPTEHYNP 301

  Fly   880 FLTYLKE--NYKRVCETLEPVIG--VKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQR 940
            ....|.:  :.:.|..:...::|  .:.|::....||.|....|....||:.:...::.|..|..
Zfish   302 LRDLLLQSAHVQPVSASAAHILGEVCREKQEAAVPLVRLFLHYGKIVPFLSAIAHAEISRTQDPN 366

  Fly   941 LTFRGNSLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAAL 1005
            ..||||||.:|.::..:||.|..||:.||...|:|:....:.||:||.|...|.  :|...:..|
Zfish   367 TIFRGNSLTSKCIDETMKLAGMHYLRVTLKPIIDEICSDHKPCEIDPVKLKESE--NLDTNRENL 429

  Fly  1006 RGAVRGAWQCIFESHKHFPAQLRNCFATFRE----RLQQLGRQDMADNLISASIFLRFLCPAILS 1066
            |..|...:..|..|....|..:.:.|.:.||    |.|.  ..|:....:|:.|||||..|||||
Zfish   430 RQYVDRIFSVITSSGVSCPTVMCDIFFSLRESAASRFQV--DADVRYTAVSSFIFLRFFAPAILS 492

  Fly  1067 PSLFNITSELPSARATRNLTLVAKTLQTLANFTRFQG---KENFMEFLNDFLEQE--AARMQQFL 1126
            |:||::....|....:|.|||::||:|||.:..:.:.   ||::|....|:..::  |..::.||
Zfish   493 PNLFHLRPHHPDPCTSRTLTLISKTIQTLGSLAKSKSANFKESYMAAFYDYFNEQKYADAVKNFL 557

  Fly  1127 EIISTRPEHPAPDSILDWAGYIDQGKQLSI-LHSLLSESLAKLPEAR------------------ 1172
            ::||         |...|       .|.|| ...:|.|...||...|                  
Zfish   558 DLIS---------SSARW-------DQKSIETPIMLKEGSVKLIIKRFDAKGSGRFMIKRAQGRN 606

  Fly  1173 ---------------QHELD-----------------PLQH------------------------ 1181
                           .||..                 |:::                        
Zfish   607 RFGLKNFKKRWFRLTNHEFTYHKTKGNAKGEGALCSIPIENILAVERLEEESFKMKNMFQVIQPE 671

  Fly  1182 ------------------ILDEISRAKEHGMGTALPGGYLPATSSTHSIASENQENRNPGSSGSH 1228
                              ||.::|:.....:.|..|..:|    :.|.:..:...:..||.:...
Zfish   672 RALYIQANNCVEARDWIDILTKVSQCNRKRLSTFHPSAFL----NGHWLCCKLSADTAPGCTPCT 732

  Fly  1229 AG------------SNSEQLL----PQQSQLAQPQHAIVSKPLSAERGIMRGVLTPNSLEKNIFR 1277
            .|            ..:|::.    ...|:|.:.|.|..||      .:..|   |...|.:.|.
Zfish   733 GGLPANIQLDVDGDRETERIYSLYSTYMSKLVKMQEACGSK------SVYDG---PEQEEYSTFV 788

  Fly  1278 YNDP-----TVNGLLQQQQQQQQQQQQQQQQHQQLQQHGHQQQPHHQHPLQMLSNSQT 1330
            .:||     |:..::...|..:||..|.::...:..::|.|:.|......|.....|:
Zfish   789 IDDPQETYKTLRLVISAVQTLEQQHTQYKRDKFRKTKYGSQEHPIGDQSFQCYIRQQS 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 17/113 (15%)
C2_SynGAP_like 721..874 CDD:175980 31/170 (18%)
RasGAP_DAB2IP 865..1192 CDD:213338 98/432 (23%)
DUF3498 <1927..1997 CDD:463427
rasa3XP_009303503.1 C2A_RasA2_RasA3 13..133 CDD:176046 20/119 (17%)
C2B_RasA3 146..287 CDD:175977 39/230 (17%)
RasGAP 296..563 CDD:470620 81/279 (29%)
PH-like 561..705 CDD:473070 17/159 (11%)
BTK 698..733 CDD:128417 6/38 (16%)
Blue background indicates that the domain is not in the aligned region.

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