DRSC/TRiP Functional Genomics Resources

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Protein Alignment raskol and dab2ip

DIOPT Version :9

Sequence 1:NP_001285388.1 Gene:raskol / 32754 FlyBaseID:FBgn0261570 Length:2016 Species:Drosophila melanogaster
Sequence 2:XP_031747913.1 Gene:dab2ip / 100145038 XenbaseID:XB-GENE-955266 Length:1192 Species:Xenopus tropicalis


Alignment Length:1495 Identity:420/1495 - (28%)
Similarity:626/1495 - (41%) Gaps:454/1495 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   586 EKACRRGSAPTTPILGSKQHQT---EHNATS--RFTNFFSKK-SNPLKRTKSVTKLERTK----- 639
            |:..||.|.|     ||...|:   :.:||:  |.|.|.|:: ...:|||||..||:|..     
 Frog    45 ERTGRRRSMP-----GSSSDQSPTMDQSATTPFRVTGFLSRRLKGSIKRTKSQPKLDRNSSFRHI 104

  Fly   640 ----RGSGG--------LRGSRSHESLLSSHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRG 692
                |....        |:.|||||||||..:.:..:|||....|.:.|||.|:||:..||:|..
 Frog   105 IPGFRSVDNERSHLMPRLKESRSHESLLSPSSAVDALDLSMEEEVVIKPVHSSILGQDFCFEVTA 169

  Fly   693 GPRGERYYSCGSRQERDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKKRYFCELQLDK 757
            . .|.:.:||.|..|||.|:.:||:::.||.:::||.:|.||:|:.|||:||.||:|.|||.||.
 Frog   170 S-TGSKCFSCRSAAERDKWMENLRRAVHPNKDNSRRIENMLKLWIIEAKDLPAKKKYLCELYLDD 233

  Fly   758 TLYGRTSVKLQTDLLFWGEHFDFPDIPEINVITVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSR 822
            .||.||:.||:||.:||||||:|.::|.:..|||::::|.|||||:||..:||.|.||:..||.|
 Frog   234 ILYARTTCKLKTDNVFWGEHFEFNNLPTLKSITVHLYKETDKKKKKDKNNYVGLVSIPIGAVTGR 298

  Fly   823 LPCEQWYPILSDKAGDSLGRTSGGGGSGSKDKEQLPTLRIKCRFQSTDILPINVYGNFLTYLKEN 887
            |..|:||||::  ...|.|::.|            |.:|||.|:||..|||:.:|..|..|:..|
 Frog   299 LFVEKWYPIVT--PNPSKGKSCG------------PMIRIKTRYQSISILPMEMYKEFAEYITNN 349

  Fly   888 YKRVCETLEPVIGVKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGD-QRLTFRGNSLATK 951
            |..:|.|||.::.||.||::..|||.::.:.|.|..||||::..::.|.|| :.|.||.|:||||
 Frog   350 YMVLCSTLEGILSVKNKEEMASALVHILQSTGKAKDFLTDLMMSEVDRCGDNEHLIFRENTLATK 414

  Fly   952 SMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKTSGSSAGSLQRQQAALRGAVRGAWQCI 1016
            ::|.:|||.|::||||.|...|..|.:|:.:|||||.|.|.|   .|...|:.|:.....|:..|
 Frog   415 AIEEYLKLVGQKYLQDALGEFIKALYESDENCEVDPNKCSTS---DLPEHQSNLKMCCELAFCKI 476

  Fly  1017 FESH--KH-FPAQLRNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSLFNITSELPS 1078
            ..|:  .| ||.:|:..||::|:.....||.|:::.|||||:|||||||||:||||||:..|.|.
 Frog   477 INSYWSVHVFPRELKEVFASWRQECNSRGRPDISERLISASLFLRFLCPAIMSPSLFNLLQEYPD 541

  Fly  1079 ARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPEHPAPDSILD 1143
            .|..|.|||:||..|.||||.:|..||.:|.|:|.|||.|...||:||..||.      |::|.:
 Frog   542 DRTARTLTLIAKVTQNLANFAKFGSKEEYMSFMNQFLEHEWTNMQRFLLEISN------PETISN 600

  Fly  1144 WA---GYIDQGKQLSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGMGTALPGGYLPA 1205
            .|   ||||.|::||.|||||.:.:|::.:|...:|.||..||.:::      .|.:.|.....:
 Frog   601 TAGFEGYIDLGRELSTLHSLLWDVIAQMDQATVSKLGPLPRILRDVT------TGLSNPSSIQSS 659

  Fly  1206 TSSTHSIASENQENRNPGSSGSHAGSNSEQLLPQQSQLAQPQHAIVSKPLSAERGIMRGVLTPNS 1270
            .||.||.::.|..|           ..|..|          |..::...|:......| :.:|..
 Frog   660 ISSEHSASTPNASN-----------CISVGL----------QKMVIENDLAGLIDFTR-LPSPTP 702

  Fly  1271 LEKNIFRYNDPTVNGLLQQQQQQQQQQQQQQQQHQQLQQHGHQQQPHHQHPLQMLSNSQTSIAGN 1335
            ..|::|                                                           
 Frog   703 ENKDLF----------------------------------------------------------- 708

  Fly  1336 QYMSSPGGLQHAQSQTSMASSSLNGSSSNLLHGHQQHAHHPQQLHPHHCPPAPQTSASSTMERMD 1400
             :::...|:|                                        |:|..|:|.:     
 Frog   709 -FVTRSAGVQ----------------------------------------PSPARSSSYS----- 727

  Fly  1401 RMNYPYMSHNGNDYETSTPSSTRSRTLPRNGNPNANGNVGSSNNNQSGSYDDMHGEFQIQISGFD 1465
                          |.:.|                  :|..:|.|:|.|..|:.....:.| |.:
 Frog   728 --------------EANEP------------------DVQITNGNKSLSMVDLQDNRVLDI-GTN 759

  Fly  1466 TSSAFVCKSPTPMMKSSLGPAGAGRSHHKLNLGIPDHSGGYVRGNNLNPNSNMPKNLEDLDDLFK 1530
            ||..                                       |::||.:......|:.:     
 Frog   760 TSGT---------------------------------------GDSLNDSQTSFSQLQAI----- 780

  Fly  1531 YAEEHDVAEPANHHNHNQGQQNHQGHLKPAAVPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPV 1595
                             ...:..||::..               .::..::..|..:|:..::|.
 Frog   781 -----------------WTARTPQGNIMT---------------MTTARRTGQTPTTPNSDTAPG 813

  Fly  1596 ESQLKAAMGSHNAPLAFKNPSYQL------QPQ-TGSSRSSAQSNTHQQQQQQQQQQFGSRLKPI 1653
            ..||.       |||:|:||.||:      .|: .|.|.|...|:.......:.           
 Frog   814 RPQLL-------APLSFQNPVYQMAAGLPVSPRGLGDSGSECHSSLSSHSNSED----------- 860

  Fly  1654 GGGLVAARAAFLNSGGALEAATLTPSSSDEQLSADNYFSYAAAAAAGAGIATKLEAQRSLSGGSS 1718
               |..::..|:|.|            |.|..|                         ..||...
 Frog   861 ---LAGSKHGFMNPG------------STEDFS-------------------------RRSGDMC 885

  Fly  1719 SSTSASASTSNLGKSGGSSAYGRLN--GPLKRED-----------------------VYGSGYGG 1758
            .|...|....:|....|.....|.|  ||.:|.|                       .|.....|
 Frog   886 RSVDMSRRQHSLCDKTGQPTMPRQNSSGPQRRIDQPPPPPPPPMTRGRTPPTLLSTATYQRPSSG 950

  Fly  1759 SSGNVGYGLSTSSAAGHHQHPHQQQQNPMQQQQQRERDQEHKQYAGSVAGSVGSATSAAQRRLSL 1823
            |..:.......|.|....|....:..:|    :.::|...|||....|..:....|:|....:::
 Frog   951 SMMSSSPDWPGSGARVRQQSSSSKGDSP----EMKQRTLHHKQAPSPVNPNALDRTAAWLLNMNM 1011

  Fly  1824 DSARTLSDSSTDTEGHCNQLQEGKRRRQLRSSGGSGGGGAGSEQGLGKSYDQNGEIQLLQQTL-- 1886
               :.|.|.|.:        .:.|.|.:||:.         .|....:.|.|  ||.:||:.|  
 Frog  1012 ---QLLEDESPE--------PDIKHRDKLRNK---------EELSQAEKYQQ--EIMMLQEKLRL 1054

  Fly  1887 --------DTLCHTLDRD--------EAELRDSSDELFGLQRPAGSNGSNNLSLQSESTMRSIID 1935
                    :..|.:.|..        :|.|.:|.|.|...|.            ..|..|:.||.
 Frog  1055 SNKKLEDYEIRCKSQDEQTQKLLLEYQARLEESEDRLRRQQE------------DKEMQMKGIIS 1107

  Fly  1936 SFFQSSCRLITMEEELRREQLKMSLALSHKQRVIEEQGQQIAALDAANSRLLSALTALRQRYETQ 2000
                   ||:::||||:::..:|..|:..||::|:.|.::||:|||||:||:||||.|::||..|
 Frog  1108 -------RLMSVEEELKKDHAEMQAAVDSKQKIIDAQEKRIASLDAANARLMSALTQLKERYSMQ 1165

  Fly  2001  2000
             Frog  1166  1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
raskolNP_001285388.1 PH_RasSynGAP-like 615..729 CDD:270082 48/131 (37%)
PH <656..720 CDD:278594 24/63 (38%)
C2_SynGAP_like 721..874 CDD:175980 74/152 (49%)
RasGAP 856..1185 CDD:214617 152/335 (45%)
RasGAP_DAB2IP 865..1192 CDD:213338 148/333 (44%)
dab2ipXP_031747913.1 PH_DAB2IP 74..255 CDD:270179 79/181 (44%)
C2_SynGAP_like 197..336 CDD:175980 74/152 (49%)
RasGAP_DAB2IP 327..650 CDD:213338 148/337 (44%)
DUF3498 643..1153 CDD:403279 140/854 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 130 1.000 Domainoid score I5143
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 551 1.000 Inparanoid score I1112
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D44624at33208
OrthoFinder 1 1.000 - - FOG0000844
OrthoInspector 1 1.000 - - otm47902
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X495
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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