DRSC/TRiP Functional Genomics Resources

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Protein Alignment par-6 and pard6a

DIOPT Version :9

Sequence 1:NP_573238.1 Gene:par-6 / 32752 FlyBaseID:FBgn0026192 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001093521.2 Gene:pard6a / 792828 ZFINID:ZDB-GENE-070705-215 Length:385 Species:Danio rerio


Alignment Length:392 Identity:177/392 - (45%)
Similarity:237/392 - (60%) Gaps:57/392 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKNKINTTSATAASDTNLIEVKSKFDAEFRRWSFKRNEAEQSFDKFASLIEQLHKLTNIQFLIL 65
            ||:|.    ..|..::.:::||||||:.|:||::.|:|..  .|.:|..|::.:|::..:..|:.
Zfish     1 MSRNH----RTTLKNEESVVEVKSKFEGEYRRFALKKNTG--GFQEFYQLLQTIHRIPGVDVLLG 59

  Fly    66 YIDPRDNDLLPINNDDNFGRALKTARPLLRVIVQRK--DDLNEYSGFGTMKPRNLIGSILMGHTP 128
            |.|.. .||||||||.||.:||.:|.||||:|||::  ||...:. .|:::.|......|....|
Zfish    60 YADIH-GDLLPINNDYNFHKALSSANPLLRIIVQKRVVDDTVPFP-TGSLQRRKKGPGGLRQAQP 122

  Fly   129 VKTKAPSISIPHDFRQVSAIIDVDIVPETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQP 193
             |::.|.|.:|.||||:|:||||||:||||.||||.|||:.||||||||||.|||||:.|:||.|
Zfish   123 -KSRPPLIGLPQDFRQISSIIDVDILPETHLRVRLHKHGTHKPLGFYIRDGVSVRVTSHGVEKFP 186

  Fly   194 GIFISRLVPGGLAESTGLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPANQRTLT 258
            ||||||||.||||::||||.||||::|||||:|:||:||||||||||||.|||:|||||..|:|.
Zfish   187 GIFISRLVKGGLADTTGLLGVNDEILEVNGIDVSGKSLDQVTDMMVANSHNLIVTVKPAIYRSLD 251

  Fly   259 STHR---------GSFSRNSQLSSGSHH------TNNTNTSDEIEHDDQDDIVDLTGVTLDESPT 308
            .|:|         .:.||.|.||..|.|      |:..:.|:.:...|.||..||   .::....
Zfish   252 DTYRTFKTSAGNSSAGSRGSALSHDSAHSPASQNTSQYSNSNSVAEGDSDDDTDL---IIENDNL 313

  Fly   309 STSA--------GNHN---------HQP-------PLSSSPSS----HHQQAASNASTIMASDVK 345
            ||.|        |:|.         |:|       |.|||.||    .|..:.:..|:...|..:
Zfish   314 STYAQNRLTNGNGSHGNAQSSGAFAHRPLPQSVSLPSSSSLSSLTTPTHNGSPTKTSSSQESMRE 378

  Fly   346 DG 347
            ||
Zfish   379 DG 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-6NP_573238.1 PB1_Par6 20..101 CDD:99724 38/80 (48%)
PDZ_signaling 159..250 CDD:238492 70/90 (78%)
pard6aNP_001093521.2 PB1_Par6 16..94 CDD:99724 38/80 (48%)
PDZ_signaling 153..243 CDD:238492 70/89 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586325
Domainoid 1 1.000 138 1.000 Domainoid score I4832
eggNOG 1 0.900 - - E1_KOG3606
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I2768
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D356104at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24683
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14102
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1143
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.860

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