DRSC/TRiP Functional Genomics Resources

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Protein Alignment par-6 and Pard6g

DIOPT Version :9

Sequence 1:NP_573238.1 Gene:par-6 / 32752 FlyBaseID:FBgn0026192 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_001094443.1 Gene:Pard6g / 307237 RGDID:1305016 Length:382 Species:Rattus norvegicus


Alignment Length:342 Identity:178/342 - (52%)
Similarity:226/342 - (66%) Gaps:22/342 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DTNLIEVKSKFDAEFRRWSFKRNEAEQSFDKFASLIEQLHKLTNIQFLILYIDPRDNDLLPINND 80
            |.:.:||||||.|||||:|..|::..: |:.|..|:...|.::|.:..|.|.|.. .||||||||
  Rat    15 DCSAVEVKSKFGAEFRRFSLDRHKPGK-FEDFYQLVVHTHHISNTEVTIGYADVH-GDLLPINND 77

  Fly    81 DNFGRALKTARPLLRVIVQRKDDLNEYS-GFGTMKPRNLIGSILMGHTPVKTKAPSISIPHDFRQ 144
            |||.:|:.:|.|||||.:|::::.:.|| |.||:..:..:...|......:....:||:|||||.
  Rat    78 DNFCKAVSSANPLLRVFIQKREEADHYSFGAGTLSRKKKVLVTLRDEGLRRRAQLNISMPHDFRP 142

  Fly   145 VSAIIDVDIVPETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAEST 209
            ||:||||||:|||||||||.:||.:||||||||||||||||..||||.|||||||:|||||||||
  Rat   143 VSSIIDVDILPETHRRVRLYRHGCEKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAEST 207

  Fly   210 GLLAVNDEVIEVNGIEVAGKTLDQVTDMMVANSSNLIITVKPANQR--TLTSTHRGSFSRNSQLS 272
            |||||||||:|||||||||||||||||||:|||.|||:||||||||  .:.|:.....|..|..|
  Rat   208 GLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRSSRASGSSVQSTDS 272

  Fly   273 SGSHH----TNNTNTSDEIEHDDQDDIVDLTGVTLDESPTSTSAGNHNHQPPLSSSPSSHHQQAA 333
            :.|||    |:....|:|:|.|::.||| :.|           |...:|.|.:.:.|.....: |
  Rat   273 TTSHHSLPGTHALQNSEEMESDEEADIV-IEG-----------ALEPHHIPKMQAVPPGSLSR-A 324

  Fly   334 SNASTIMASDVKDGVLH 350
            :.||........||.||
  Rat   325 NGASLAHRLHRGDGGLH 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
par-6NP_573238.1 PB1_Par6 20..101 CDD:99724 40/80 (50%)
PDZ_signaling 159..250 CDD:238492 78/90 (87%)
Pard6gNP_001094443.1 PB1_Par6 19..98 CDD:99724 40/80 (50%)
PDZ_signaling 157..248 CDD:238492 78/90 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345236
Domainoid 1 1.000 83 1.000 Domainoid score I8141
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36487
Inparanoid 1 1.050 302 1.000 Inparanoid score I2592
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D356104at33208
OrthoFinder 1 1.000 - - FOG0003376
OrthoInspector 1 1.000 - - otm44574
orthoMCL 1 0.900 - - OOG6_106218
Panther 1 1.100 - - LDO PTHR14102
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1143
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.900

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