DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8188 and RAD6

DIOPT Version :9

Sequence 1:NP_001033852.1 Gene:CG8188 / 32751 FlyBaseID:FBgn0030863 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_011457.1 Gene:RAD6 / 852822 SGDID:S000003026 Length:172 Species:Saccharomyces cerevisiae


Alignment Length:165 Identity:57/165 - (34%)
Similarity:85/165 - (51%) Gaps:6/165 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPL 75
            :|....|::||:.:.|:...|.|:.......:|....|:|.|||.|||..|.||:.|..::::|.
Yeast     1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPN 65

  Fly    76 TPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKML 140
            .||...||:::|||||.||||||::.|:..|.|...:..||.:|:.|...|||.|..|.||..:.
Yeast    66 KPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLF 130

  Fly   141 LERYDDYSQRARMMTEIHAQPAKCGVGAVGDAKDD 175
            .:....|.:|.:...|      |.....:.|..||
Yeast   131 KDHKSQYVKRVKETVE------KSWEDDMDDMDDD 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8188NP_001033852.1 COG5078 12..159 CDD:227410 53/146 (36%)
UBCc 16..155 CDD:238117 51/138 (37%)
RAD6NP_011457.1 COG5078 1..150 CDD:227410 54/154 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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