DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8188 and UBC1

DIOPT Version :9

Sequence 1:NP_001033852.1 Gene:CG8188 / 32751 FlyBaseID:FBgn0030863 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_010462.3 Gene:UBC1 / 851757 SGDID:S000002584 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:197 Identity:54/197 - (27%)
Similarity:102/197 - (51%) Gaps:16/197 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RQVMRELQEMETTPPEGIKV-LINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKA 80
            :::|:|:|.::..|...|.: .::|||:..::....||.||||..|.|.|.:.:..::|..|||.
Yeast     5 KRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKM 69

  Fly    81 YFLTKIFHPNVAA-NGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERY 144
            .|.||::|||::: .|.||::.||..|.|.:.:|..|::::.||..|.|....:.|..:..|...
Yeast    70 QFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDR 134

  Fly   145 DDYSQRARMMTEIHAQPAKCGVGAVGDAKDDGGPSTKKHAGLDKKLQDK------KKEKLLKEKK 203
            :.:::.|.:.|.::|.....|        ..|........|:|..|.|:      :|:|:::..:
Yeast   135 ESFNKTAALWTRLYASETSNG--------QKGNVEESDLYGIDHDLIDEFESQGFEKDKIVEVLR 191

  Fly   204 RM 205
            |:
Yeast   192 RL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8188NP_001033852.1 COG5078 12..159 CDD:227410 44/143 (31%)
UBCc 16..155 CDD:238117 43/139 (31%)
UBC1NP_010462.3 COG5078 1..151 CDD:227410 45/145 (31%)
UBA_3 161..215 CDD:117832 7/33 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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