DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8188 and vih

DIOPT Version :10

Sequence 1:NP_573237.2 Gene:CG8188 / 32751 FlyBaseID:FBgn0030863 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster


Alignment Length:123 Identity:41/123 - (33%)
Similarity:60/123 - (48%) Gaps:0/123 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAY 81
            :::.:||..:......||....:..::......|.||..|.|:...:|:.|.....:|...|...
  Fly    35 KRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVK 99

  Fly    82 FLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKM 139
            |||..|||||...|.||::.||..|.....::.|||:|:.||..||.||.||.:|..|
  Fly   100 FLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMM 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8188NP_573237.2 UBCc_UBE2S 13..158 CDD:467424 41/123 (33%)
vihNP_648582.1 UBCc_UBE2C 34..173 CDD:467411 41/123 (33%)

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