DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8188 and Ubc84D

DIOPT Version :9

Sequence 1:NP_001033852.1 Gene:CG8188 / 32751 FlyBaseID:FBgn0030863 Length:209 Species:Drosophila melanogaster
Sequence 2:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster


Alignment Length:148 Identity:41/148 - (27%)
Similarity:72/148 - (48%) Gaps:7/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RQVMRELQEMETTPPEGIKVLINESDVTDIQ---ALIDGPAGTPYAAGIFRVKLTLNKDFPLTPP 78
            |::.|||.::.......:: .|..||.:.:.   .|:  |...||..|.||:::.....:|..||
  Fly     5 RRLTRELSDLVEAKMSTLR-NIESSDESLLMWTGLLV--PEKAPYNKGAFRIEINFPPQYPFMPP 66

  Fly    79 KAYFLTKIFHPNVAANGEICVNTLKKD-WKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLE 142
            |..|.|||:||||...||:|:..:..| |||....:.:|..:..::..|.||..|..:..:..:.
  Fly    67 KILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVR 131

  Fly   143 RYDDYSQRARMMTEIHAQ 160
            .:..:.:.|...|:.:|:
  Fly   132 EHKKFMKTAEEFTKKNAE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8188NP_001033852.1 COG5078 12..159 CDD:227410 40/145 (28%)
UBCc 16..155 CDD:238117 39/141 (28%)
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 41/148 (28%)
UBCc 6..149 CDD:214562 39/145 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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