DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12990 and rhy-1

DIOPT Version :9

Sequence 1:NP_573233.1 Gene:CG12990 / 32747 FlyBaseID:FBgn0030859 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_495954.1 Gene:rhy-1 / 174455 WormBaseID:WBGene00012324 Length:502 Species:Caenorhabditis elegans


Alignment Length:455 Identity:96/455 - (21%)
Similarity:166/455 - (36%) Gaps:112/455 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 LRVLTAFSLIGVHVIWYKYFSVDPSVEMLGKL-------SSMTMRHTYWPTM------VEIFFVV 305
            |.||..|..:.:..:...:...:..:::|.:|       |:|.....:...|      ||||.|:
 Worm    92 LDVLDIFRFVAILWVMLNHTGSEGRIDILDRLPSADAFKSAMHDHPIFGALMGNSALGVEIFLVL 156

  Fly   306 SGYLTVLNFIR--DEQLQKDIASDGILGNMRRYLREFI-HRYCRLAPLQFVIVLMGVVVIEYQRQ 367
            ||.|...:::|  ||.             ..::.:.|| .|..||||..|:.|        |...
 Worm   157 SGLLAARSWLRKADEP-------------FFQHWKSFIARRLLRLAPSMFIFV--------YIAA 200

  Fly   368 VSVMQITDPQDELCRLNA------VRNVFFIQNLFPIQFMCGSWTWSLGCDMQLHMTAMLLLFMH 426
            ..:|....|:.....::|      :.:|.|..| :.....|..:.|.||.||||:|.|.:.|.:.
 Worm   201 GPIMNALLPRYSSSMVSACGFWGILSHVTFTSN-WQSTPTCMGYLWYLGLDMQLYMVAPIFLNLL 264

  Fly   427 TKHP--NMVKWIVRLL--VVISALFSIVFMEVNE--------------------VGANFEEMYHT 467
            .|.|  .|...|..::  :||.|.:...:...|:                    :.|...:|| :
 Worm   265 HKFPKRGMALTITTIIASMVIRAGYCTAYGTCNQSDVDIPFISYPGQDAETLKSIYAGLWDMY-S 328

  Fly   468 NEWSYMSP-LIRMLAYIIGGSYAFFQVKGTG-TPFD-----------LVMPNWWIRLGAIACIGW 519
            ..::...| ||.:|...|..|..:..|..|. |.|.           .::|.:|...........
 Worm   329 RPYTKCGPFLIGLLLGYITVSSKYIMVSTTSKTLFRSSLIVAIATIYAILPEYWNPNAGNTLYNT 393

  Fly   520 LARQVTMDQLPAISIILSFMVVLRILVSTAASHLIICGTKPDNSDSYAPTRWLLALLQSEQVQRI 584
            :...|             |..|..:.:|...:.|..       ...|.||..:.|:|        
 Worm   394 VYTAV-------------FRSVFAMAISGMIAALYF-------RQEYRPTNPIFAML-------- 430

  Fly   585 SKFTYAIYLLN-PIVIMYVYHSFSNEVYPDNTMMIMLAISCSVVCYLWAIVMTVLFEIPFNRLTS 648
            :|.||..|||: |:|.::.:..|.........::::|.. .:::.::.|::..:..|.|...|||
 Worm   431 AKLTYNAYLLHMPVVYIFNWLPFLQAATSPIHLLLVLPF-VAILSFIAALIFYLFIEAPIGHLTS 494

  Fly   649  648
             Worm   495  494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12990NP_573233.1 NRF 61..162 CDD:214781
Acyl_transf_3 251..637 CDD:280013 91/442 (21%)
OafA 295..660 CDD:224748 88/407 (22%)
rhy-1NP_495954.1 OafA 89..489 CDD:224748 92/448 (21%)
Acyl_transf_3 95..479 CDD:280013 88/435 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161208
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1171418at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11161
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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