DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12990 and rhy-1

DIOPT Version :10

Sequence 1:NP_573233.1 Gene:CG12990 / 32747 FlyBaseID:FBgn0030859 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_495954.1 Gene:rhy-1 / 174455 WormBaseID:WBGene00012324 Length:502 Species:Caenorhabditis elegans


Alignment Length:455 Identity:96/455 - (21%)
Similarity:166/455 - (36%) Gaps:112/455 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 LRVLTAFSLIGVHVIWYKYFSVDPSVEMLGKL-------SSMTMRHTYWPTM------VEIFFVV 305
            |.||..|..:.:..:...:...:..:::|.:|       |:|.....:...|      ||||.|:
 Worm    92 LDVLDIFRFVAILWVMLNHTGSEGRIDILDRLPSADAFKSAMHDHPIFGALMGNSALGVEIFLVL 156

  Fly   306 SGYLTVLNFIR--DEQLQKDIASDGILGNMRRYLREFI-HRYCRLAPLQFVIVLMGVVVIEYQRQ 367
            ||.|...:::|  ||.             ..::.:.|| .|..||||..|:.|        |...
 Worm   157 SGLLAARSWLRKADEP-------------FFQHWKSFIARRLLRLAPSMFIFV--------YIAA 200

  Fly   368 VSVMQITDPQDELCRLNA------VRNVFFIQNLFPIQFMCGSWTWSLGCDMQLHMTAMLLLFMH 426
            ..:|....|:.....::|      :.:|.|..| :.....|..:.|.||.||||:|.|.:.|.:.
 Worm   201 GPIMNALLPRYSSSMVSACGFWGILSHVTFTSN-WQSTPTCMGYLWYLGLDMQLYMVAPIFLNLL 264

  Fly   427 TKHP--NMVKWIVRLL--VVISALFSIVFMEVNE--------------------VGANFEEMYHT 467
            .|.|  .|...|..::  :||.|.:...:...|:                    :.|...:|| :
 Worm   265 HKFPKRGMALTITTIIASMVIRAGYCTAYGTCNQSDVDIPFISYPGQDAETLKSIYAGLWDMY-S 328

  Fly   468 NEWSYMSP-LIRMLAYIIGGSYAFFQVKGTG-TPFD-----------LVMPNWWIRLGAIACIGW 519
            ..::...| ||.:|...|..|..:..|..|. |.|.           .::|.:|...........
 Worm   329 RPYTKCGPFLIGLLLGYITVSSKYIMVSTTSKTLFRSSLIVAIATIYAILPEYWNPNAGNTLYNT 393

  Fly   520 LARQVTMDQLPAISIILSFMVVLRILVSTAASHLIICGTKPDNSDSYAPTRWLLALLQSEQVQRI 584
            :...|             |..|..:.:|...:.|..       ...|.||..:.|:|        
 Worm   394 VYTAV-------------FRSVFAMAISGMIAALYF-------RQEYRPTNPIFAML-------- 430

  Fly   585 SKFTYAIYLLN-PIVIMYVYHSFSNEVYPDNTMMIMLAISCSVVCYLWAIVMTVLFEIPFNRLTS 648
            :|.||..|||: |:|.::.:..|.........::::|.. .:::.::.|::..:..|.|...|||
 Worm   431 AKLTYNAYLLHMPVVYIFNWLPFLQAATSPIHLLLVLPF-VAILSFIAALIFYLFIEAPIGHLTS 494

  Fly   649  648
             Worm   495  494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12990NP_573233.1 NRF 44..161 CDD:466307
OafA 241..658 CDD:441440 96/455 (21%)
rhy-1NP_495954.1 OafA 86..489 CDD:441440 92/448 (21%)
Blue background indicates that the domain is not in the aligned region.

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