DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beta-Spec and Ehbp1

DIOPT Version :9

Sequence 1:NP_001259660.1 Gene:beta-Spec / 32746 FlyBaseID:FBgn0250788 Length:2308 Species:Drosophila melanogaster
Sequence 2:NP_995865.2 Gene:Ehbp1 / 36912 FlyBaseID:FBgn0034180 Length:1141 Species:Drosophila melanogaster


Alignment Length:1012 Identity:197/1012 - (19%)
Similarity:332/1012 - (32%) Gaps:381/1012 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 ENIGSHDIVDGNASLNLGLIWTIILRFQIQDITIEEVDNKETKSAKDALLLWCQMKTAGYHNVNV 191
            |:|||.....|:.:.:|..:..|:|              ||....:| ||.||:..|..|.||.|
  Fly   431 ESIGSCFSTSGSLNNSLKPVEKIVL--------------KENTPGQD-LLEWCKEVTKDYPNVKV 480

  Fly   192 RNFTTSWRDGLAFNAIIHKHRPDLVQFEKLSKTNAIHNLNNAFDVAEDKLGLAKLLDAEDV-FVE 255
            .|.|||||:|:||.||||...|:|:...|||..:.:.|....||.|| .||:.::::..|: .:.
  Fly   481 TNLTTSWRNGMAFCAIIHHFVPELIDMSKLSAHDVVGNCRIGFDAAE-SLGIPRVIEPRDMNMLT 544

  Fly   256 HPDEKSIITYVVTYYHYFSKLKQETVQGK--RIGKVVGIAMENDKMVHDY--ENFTSDLLKWIET 316
            .||:.:::||:.....:|:        ||  :|.::...|.|:..::.||  :|.:.:.:.:...
  Fly   545 VPDKLAVMTYLHQLRAHFT--------GKQLKIEQIGSTADESSYVIGDYKSDNLSQNRINFSHP 601

  Fly   317 TIQSLGEREFENSLAGVQGQLAQFSNYRTIEKPPK----FVEKGNLEVLLFTLQSKMRAN----- 372
            ....|.:..|:..:.| ..:..|.|  .|.:|..|    :..|..|:.:|...:.|...|     
  Fly   602 KSLLLHQNSFDEEING-SNKSEQLS--PTSKKDVKNLILYNSKNILDKVLSPTKDKNSINASQHA 663

  Fly   373 NQKPY-----TP--------------KEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQ 418
            ||.|.     ||              ||...|:.|:.     :.|..||:    :.|:.|.:...
  Fly   664 NQSPMLSCQTTPPQDESLDKGSQPGGKENSSITTIDP-----QAASEERQ----QRLLEQARRLI 719

  Fly   419 LAARFDRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVVAVCDE 483
            |..|.....|:......:.:|.:|..:.|.:....| .|||.|..|..                 
  Fly   720 LETRVKSGGSIESPTRPKLERTISPIHNGAEEFYAE-HAKKLELKEPG----------------- 766

  Fly   484 LESERYHDVKRILLRKDNVMRLWTYLLELLRARRMRLEISLQLQQNFQEMLYILDNMEEIKQLLM 548
            ..|.|..|.|        |::.:..::|         .:|.:.::...::.||...:|.:::   
  Fly   767 SPSHRLSDPK--------VLQSFNAIVE---------RVSPKHEKRGDKLSYIDSELEALER--- 811

  Fly   549 TDDYGKHLMGVEDLLQKHSLVEADIN-ILG----ERVKVVVQNSQKFLSDDPESYKPCDPEIIVS 608
                     ..|.:.||.|.:||.:. ::|    ...:...:||..||                 
  Fly   812 ---------EQEAIDQKASNLEAKLRAVMGGNPSNNRRGGARNSNPFL----------------- 850

  Fly   609 RVQQLEDAYAELVRLAVERRSRLEESRKLWQFYWDTADEENWIKEKEQIVSTDEVGHDLTTVNLM 673
                      .|:|.::.                                     |.|:..:.|:
  Fly   851 ----------RLIRNSIG-------------------------------------GGDVIRIKLL 868

  Fly   674 LSKHKALE--------------SEITSHDPQLQNVAKVGSELITEGHFGADRIKDRLK------- 717
            .|..::|.              ||....|....:|...|.||.|       |::.|.:       
  Fly   869 DSDDESLFGGGAGSGGGRSGACSEDDDRDTSSDSVCNSGDELHT-------RLRPRPRSHSCFVN 926

  Fly   718 ----EILNKWDHLLDLTKYRRQRLENAVEYFQLFADADDVDNWMLDTLRIVSSEDVGRDEANVQS 778
                ..:|...||      |...:.:.|.|           ..|||               :..|
  Fly   927 KNHQSTINTPAHL------RPHHVHHVVPY-----------THMLD---------------SSPS 959

  Fly   779 LLKKHKDVADELKNYAEVIDALHKQAESLKLNEAEKANVDKRLEAIDNRYKELTELAKLRKQRLL 843
            .|...:...|.|...::..:.|           |..||               ...|.||:|   
  Fly   960 ALSSQQSSCDNLPACSDDDEVL-----------AVAAN---------------GRAASLRRQ--- 995

  Fly   844 DALSLYKLMSEADGVEQWIKEKTKMLDTMTPGKDIEDVEIMKHRFEGFDKEMNANASRVAVVNQL 908
                                               :|    :||.....:|..:           
  Fly   996 -----------------------------------QD----RHRRRRQRRERRS----------- 1010

  Fly   909 ARQLLHVEH-PNSDEILERQNHLNQEWSTLREKAEAKMDDLKSAHGVQTFYIECRETISWIEDKK 972
                 |:.| ||..|..|.:..|..:|.||..|..|.:                           
  Fly  1011 -----HLCHTPNHCETEETEEQLLSQWFTLVNKKNALL--------------------------- 1043

  Fly   973 RILTETDSLEMDLTGVMTLQRRLSGMDRDLAAIQAKLSSLEREANSIEDEHPEEAKIIRERIAQI 1037
            |...:.:.||.:    ..|:|:.:.::::|           |.|.|:||....|.:..:||:...
  Fly  1044 RRQMQLNILEQE----KDLERKYTMLNQEL-----------RAAQSVEDWRKTEVQREKERLLLE 1093

  Fly  1038 ELIW-----EQLTQMLKERDSKLEEAGDLHRFLRDLD 1069
            ||:.     :||.|.|..::..:|:..::.|.|..:|
  Fly  1094 ELMTIVDKRDQLVQHLHNQEIAIEDDQEIARKLEHVD 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beta-SpecNP_001259660.1 CH 51..149 CDD:278723 6/21 (29%)
CH 170..269 CDD:278723 40/99 (40%)
Spectrin 298..408 CDD:278843 28/139 (20%)
SPEC 422..521 CDD:197544 17/98 (17%)
SPEC 525..740 CDD:238103 35/244 (14%)
SPEC 639..846 CDD:238103 36/231 (16%)
SPEC 848..1058 CDD:238103 37/215 (17%)
SPEC 955..1169 CDD:238103 24/120 (20%)
SPEC 1170..1380 CDD:238103
SPEC 1386..1484 CDD:197544
SPEC 1488..1699 CDD:238103
SPEC 1594..1806 CDD:238103
SPEC 1807..2015 CDD:238103
Spectrin 2018..>2078 CDD:278843
PH 2167..2275 CDD:278594
PH_beta_spectrin 2167..2274 CDD:269975
Ehbp1NP_995865.2 NT-C2 12..165 CDD:287345
CH 460..562 CDD:237981 40/103 (39%)
DUF3585 <1027..1122 CDD:288945 27/136 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.