Sequence 1: | NP_001259660.1 | Gene: | beta-Spec / 32746 | FlyBaseID: | FBgn0250788 | Length: | 2308 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017449593.1 | Gene: | Clmn / 299285 | RGDID: | 1306741 | Length: | 1107 | Species: | Rattus norvegicus |
Alignment Length: | 1236 | Identity: | 271/1236 - (21%) |
---|---|---|---|
Similarity: | 422/1236 - (34%) | Gaps: | 451/1236 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 ERESVQKKTFTKWVNSHL--CRVNCRIADLYVDMRDGKHLIKLLEVLSGERLPKPTKGKM-RIHC 108
Fly 109 LENVDKALQFLREQRVHLENIGSHDIVDGNASLNLGLIWTIILRFQIQDIT-------------- 159
Fly 160 -------------------IEEVDNKETKSAKDALLLWCQMKTAGYHNVNVRNFTTSWRDGLAFN 205
Fly 206 AIIHKHRPDLVQFEKLSKTNAIHNLNNAFDVAEDKLGLAKLLDAEDVFVEHPDEKSIITYVVTYY 270
Fly 271 HYFSKLKQETVQGKRIGKVVGIAMENDKMVHDYENFTSDLLKWIETTI----QSLGEREFENSLA 331
Fly 332 GVQGQLAQFSNYRTIEKPPKFV----------------------------------------EKG 356
Fly 357 NLE---------VLLFTLQSKMRAN--------------------NQKPYTPKEGKMISDINKAW 392
Fly 393 ERLEKAEHERELALREELIRQEKLEQLAARFDRKASMRETWLSENQRLVSQDNFGFDLAAVEAAA 457
Fly 458 KKHEAIETDIFAYEERVQAVVAVCD-ELE-------------SERYHDVKRILLRKDNVMRLWTY 508
Fly 509 LLELLRARRMRLEISLQLQQNFQEMLYILDNMEEIKQLLMT------DDYGKHLMGVEDLLQKHS 567
Fly 568 LVEADINILGERVKVVVQNSQKFLSDDPESYKPCDPEIIVSRVQQLEDAYAELVRLAVERRSRLE 632
Fly 633 ESRKLWQFYWDTADEENWIKEKEQIVSTDEVGHDLTTVNLMLSKHKALESEITSHDPQLQNVAKV 697
Fly 698 GSELITEGH-FGADRIKDRLKEILNKWDHLLDLTKYRRQRLENAVEYFQLFADADDVDNWM---- 757
Fly 758 ------LDTLRIVSSEDVGRD-----------------------EANVQSLLKKHKDVADELKNY 793
Fly 794 AEVIDALHKQAESLKLNEAEKANVDKRLE-------------AIDNRYKELTELAKLRKQRLLDA 845
Fly 846 LSLYKLMSEADGVEQWIKEKTKMLDTMTPGK--DIEDVEIMKHRFEGFDKEMNANASRVAVVNQL 908
Fly 909 ARQLLH---VEHPNSDEILERQNHLNQEWSTL--REKAEAKMDDL-----------KSAHGVQTF 957
Fly 958 YIECRETISWIEDKKRILTETDSLEMDLTGVMTLQRRLSGMDRDLAAIQAKLSSLEREANSIEDE 1022
Fly 1023 HPEEAKIIRERIAQIELIWEQLTQMLKERDSKLEEAGDLHRFLRDLDHFQTWLTKTQTDVASEDT 1087
Fly 1088 P 1088 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
beta-Spec | NP_001259660.1 | CH | 51..149 | CDD:278723 | 51/100 (51%) |
CH | 170..269 | CDD:278723 | 43/98 (44%) | ||
Spectrin | 298..408 | CDD:278843 | 30/182 (16%) | ||
SPEC | 422..521 | CDD:197544 | 14/112 (13%) | ||
SPEC | 525..740 | CDD:238103 | 39/221 (18%) | ||
SPEC | 639..846 | CDD:238103 | 39/253 (15%) | ||
SPEC | 848..1058 | CDD:238103 | 40/227 (18%) | ||
SPEC | 955..1169 | CDD:238103 | 26/134 (19%) | ||
SPEC | 1170..1380 | CDD:238103 | |||
SPEC | 1386..1484 | CDD:197544 | |||
SPEC | 1488..1699 | CDD:238103 | |||
SPEC | 1594..1806 | CDD:238103 | |||
SPEC | 1807..2015 | CDD:238103 | |||
Spectrin | 2018..>2078 | CDD:278843 | |||
PH | 2167..2275 | CDD:278594 | |||
PH_beta_spectrin | 2167..2274 | CDD:269975 | |||
Clmn | XP_017449593.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D543832at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |