Sequence 1: | NP_001259660.1 | Gene: | beta-Spec / 32746 | FlyBaseID: | FBgn0250788 | Length: | 2308 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011908.3 | Gene: | Spta1 / 289257 | RGDID: | 1305194 | Length: | 2415 | Species: | Rattus norvegicus |
Alignment Length: | 1747 | Identity: | 450/1747 - (25%) |
---|---|---|---|
Similarity: | 795/1747 - (45%) | Gaps: | 226/1747 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 709 ADRIKDRLKEILNKWDHLLDLTKYRRQRLENAVEYFQLFADADDVDNWMLDTLRIVSSEDVGRDE 773
Fly 774 ANVQSLLKKHKDVADELKNYAEVIDALH-----KQAESLKLNEAEKANVDKRLEAIDNRYKELTE 833
Fly 834 LAKLRKQRLLDALSLYKLMSEADGVEQWIKEKTKMLDTMTPGKDIEDVEIMKHRFEGFDKEMNAN 898
Fly 899 ASRVAVVNQLARQLLHVEHPNSDEILERQNHLNQEWSTLREKAEAKMDDLKSAHGVQTFYIECRE 963
Fly 964 TISWIEDKKRILTETDSLEMDLTGVMTLQRRLSGMDRDLAAIQAKLSSLEREANSIEDEHPEEAK 1028
Fly 1029 IIRERIAQIELIWEQLTQMLKERDSKLEEAGDLHRFLRDLDHFQTWLTKTQTDVASEDTPTSLPE 1093
Fly 1094 AEKLLNQHQSIREEIDNYTEDYKNMMEYGERLTSEGSTSDDPQYMFLRERLNALKDGWEELHQMW 1158
Fly 1159 ENRQVLLSQSLDQQLFNRDARQTEVLLSQQEHFLSKDDTPVNLEQAENQLKRHEAFLTTMEANDD 1223
Fly 1224 KINTLLQVADTLVEKDHFDADKIGKRAENITGRRDDNRQRALDQHEKLKNQVKLHEFLQDLEELA 1288
Fly 1289 EWVQEKYATSQDESYRSAKTIHSKWTRHQAFEAEIAANKERLFEAEKSAQELSKEKPEFKDVIEP 1353
Fly 1354 KLKELAKQFDDLEVHTKEKGAMLFDANREVLVQQTCDDIDSYITDLEKQIVSGDTANDLTSVNIL 1418
Fly 1419 MQKQQVIQTQMAVKARQVEEIDKQTEYLQ--KTVPEEKIEPIVVKKTAVLERFEKIKAPLLERQK 1481
Fly 1482 ALEKKKEAFQFCRDVEDEKLWIDEKLPVANSPDYGNSLFNVHVLKKKNQSLATEIDNHEPRINAI 1546
Fly 1547 CNNGRKLIDEGHEDAKKFEALISDLTQKWQELKDAIENRRKHLLESEKVQQYFFDAQEAESWMSE 1611
Fly 1612 QELYMMVEDRGKDEISAQNLMKKHENLEQSVEDYANTIRQLGEVA-----RQFSGDDISSGDA-- 1669
Fly 1670 -------------VAVK------------------------------------------------ 1673
Fly 1674 ---------QSQLDKLYAGLKDLAGERRARLNEALQLFMLSREVDDLEQWITDREVVAGSQELGQ 1729
Fly 1730 DFDHVTLLSERFNEFARDTEAVGGERVAKVNGIADNLI-------QAGHSDSATIAEWKDNLNES 1787
Fly 1788 WQDLLELIETRTQMLAASRELHKFFHDCKDVLGRILEKQHGV-SDELGRDAGSVSTLQRKHYNFL 1851
Fly 1852 QDLITLYSQVQQIQEESAKLQDAYAGDKAKEITNREQEVLHAWDNLQAMCDARKQKLADTGDLFR 1916
Fly 1917 FFNMVRILMIWMEDLVRQMNTSEKPRDVSGVELLMNNHQSLKAEIDTREDNFGACISLGKELLTR 1981
Fly 1982 NHYASADIKDRLMTLSNSRNALLRRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLLSSEL 2046
Fly 2047 GHTIDEVENLIKKHEAFEKSAAAQEERFSALERLTTFEL-KEMKRRQELAEEAERQRIKEEQEAK 2110
Fly 2111 AASEAAEQAK-----------REAERRDDVDVGASH------DDSAAKDTAVEFERVVEIQTERG 2158
Fly 2159 GTPGAGEGHEGYVT------------------------RKHEWDSTTKKASNRSWDKVYMAAKAG 2199
Fly 2200 RIS-------FY----------KDQ------------KGYKSNPELTFRGEPSYDLQNAAIEIAS 2235
Fly 2236 DYTKKKHVLRVKLANG-----------------------ALF-LLQAHDDTEMSQWV 2268 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
beta-Spec | NP_001259660.1 | CH | 51..149 | CDD:278723 | |
CH | 170..269 | CDD:278723 | |||
Spectrin | 298..408 | CDD:278843 | |||
SPEC | 422..521 | CDD:197544 | |||
SPEC | 525..740 | CDD:238103 | 9/30 (30%) | ||
SPEC | 639..846 | CDD:238103 | 36/141 (26%) | ||
SPEC | 848..1058 | CDD:238103 | 58/209 (28%) | ||
SPEC | 955..1169 | CDD:238103 | 56/213 (26%) | ||
SPEC | 1170..1380 | CDD:238103 | 62/209 (30%) | ||
SPEC | 1386..1484 | CDD:197544 | 27/99 (27%) | ||
SPEC | 1488..1699 | CDD:238103 | 73/287 (25%) | ||
SPEC | 1594..1806 | CDD:238103 | 69/295 (23%) | ||
SPEC | 1807..2015 | CDD:238103 | 57/208 (27%) | ||
Spectrin | 2018..>2078 | CDD:278843 | 18/59 (31%) | ||
PH | 2167..2275 | CDD:278594 | 33/179 (18%) | ||
PH_beta_spectrin | 2167..2274 | CDD:269975 | 33/179 (18%) | ||
Spta1 | NP_001011908.3 | SPEC | 53..261 | CDD:238103 | 59/213 (28%) |
SPEC | 263..474 | CDD:238103 | 56/215 (26%) | ||
SPEC | 475..685 | CDD:238103 | 62/209 (30%) | ||
SPEC | 686..893 | CDD:238103 | 59/209 (28%) | ||
SPEC | 900..>956 | CDD:197544 | 21/55 (38%) | ||
SH3 | 980..1031 | CDD:418401 | 2/50 (4%) | ||
Spectrin | 1080..1177 | CDD:395348 | 27/109 (25%) | ||
SPEC | 1184..1393 | CDD:238103 | 58/209 (28%) | ||
SPEC | 1394..1604 | CDD:238103 | 44/217 (20%) | ||
SPEC | 1606..1817 | CDD:238103 | 26/125 (21%) | ||
SPEC | 1713..1924 | CDD:238103 | 7/17 (41%) | ||
SPEC | 1926..2144 | CDD:238103 | |||
SPEC | 2040..2256 | CDD:238103 | |||
FRQ1 | 2265..>2379 | CDD:227455 | |||
EFhand_Ca_insen | 2346..2414 | CDD:400872 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D15759at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100348 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |