DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAPp190 and AT5G12150

DIOPT Version :10

Sequence 1:NP_001259658.1 Gene:RhoGAPp190 / 32743 FlyBaseID:FBgn0026375 Length:1621 Species:Drosophila melanogaster
Sequence 2:NP_196776.1 Gene:AT5G12150 / 831088 AraportID:AT5G12150 Length:827 Species:Arabidopsis thaliana


Alignment Length:690 Identity:122/690 - (17%)
Similarity:212/690 - (30%) Gaps:210/690 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   649 AIDVYSSGLICVYSN---QQSFETLKDNLERTLLCNLELEDKFENLPIVLVYQPQD----LKENE 706
            |:.:..:|:....:|   :.||.:.:|        ...|:......||:|..:..|    ..|..
plant   131 ALVIGQNGIFRTEANNTIEASFNSWRD--------QRPLKSSVVGRPILLALEEIDGSPSFLEKA 187

  Fly   707 VEYLRNEGMRLSEMLH--CDFIDHTQNHQKY---------------VYDILNIVILSLKLTEMKS 754
            :::|...|.::..:|.  .|..:..:..|:|               |.|.:..|:..|..:    
plant   188 LQFLETYGTKVEGILRQSADVEEVERRVQEYEQGKTEFSPEEDPHVVGDCVKHVLRQLPSS---- 248

  Fly   755 YEPYPSNHTDLRILCCIFCGDQYDIENIVQPLVEESTLVKANE------HSIIVDVFIGDAKRRV 813
              |.|::       ||....:.|.|:.              ||      .|.|::.|....:|.:
plant   249 --PVPAS-------CCTALLEAYKIDQ--------------NEARVNSLRSAIIETFPEPNRRLL 290

  Fly   814 EFILSSYHGTSQYRDELIHGYIYFYSTKRRSSLA-----------------------------NL 849
            ..:|...|..:.:..|           .|.:|.|                             :.
plant   291 LRMLKMMHTITSHSSE-----------NRMTSSAVAACMSPLLLRPLLAGECDLEGFDTLGDNSA 344

  Fly   850 SILAAQNANIPLQIIAVTESGGVNAFFNSDICQFLITEGNAVADRFKGSFMTFSADQYVKFAFYN 914
            .:|||.||....|.|               :...|...||.:.|...|...| |.|.::.     
plant   345 QLLAAANAANNAQAI---------------VTALLEDYGNMINDEGLGRCST-STDSHIG----- 388

  Fly   915 PFLKTAWDNKYEVENLHVE----ESITLDSGEGTLENSVNQMPRPPPRHESYMLSNTLGTDGSGS 975
               .:..:|..:.|.:.|:    .::.::.||...:|.| .:.|.|.....|..|:.....|.|.
plant   389 ---DSGPENSSDEEEIVVKHPDLHTLDIEEGETDDDNDV-LLSRKPSESSDYAGSDLYDYKGFGV 449

  Fly   976 ENYEMAPTRSLNSLNEERDIS------LDEIYDDNE-----KPKHLHQRFQIFPPPTTPPEPAPP 1029
            |:.:....|.::...|..|.|      ::|...|.|     ..::.:|..:...|..||..|   
plant   450 EDSDAESPRDIHCSVESTDFSARVKKHIEEPIKDIEVSSVSPTENCYQSGREAIPSVTPSTP--- 511

  Fly  1030 DHQLITCTYKSQFVSASESSLEEITSDVSGSKDSLATHDAEWLEDKSDGRRNMNKNLIWNNF--S 1092
               |....|        .:|.|:..|..:||....:...:.|      ||.|..|.....:|  |
plant   512 ---LTALRY--------TTSAEKPASKTTGSSTVNSKRSSSW------GRGNGKKTPAKGSFDSS 559

  Fly  1093 GSTHAYTTGRRHIDSNLNKIRPKGPSQTLKVGEAPSRNCPAMSSSTFTLPTQQPGKLNMKNFQLV 1157
            |:.........|:...|.:...|.......:..:..|...|:......| .|..|:| .:..|..
plant   560 GNDELLIQRLEHMKDELRQRIAKEAKGNAALQASLERRKQALHERRLAL-EQDVGRL-QEQLQAE 622

  Fly  1158 SDAVAKMNFTGSGSGSGSGSGSGSTGLGLGLGSGSGCMGDSFLEPVDKDGKRYDHAQLDGEDEDS 1222
            .|..:.:.                  :||.:..|                      |...:..||
plant   623 RDLRSALE------------------VGLSISCG----------------------QFSSQAADS 647

  Fly  1223 EELAEYEQIYENE-DCTESDSCASSTERRVRQQNAYYKAS 1261
            :..||.|:|...| |........:....::.||..::.:|
plant   648 KTRAELEEIALAEADVARLKQKVAELHHQLSQQRQHHLSS 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAPp190NP_001259658.1 P-loop containing Nucleoside Triphosphate Hydrolases <148..238 CDD:476819
RhoGAP-FF1 254..333 CDD:465153
pseudoGTPaseD_p190RhoGAP 598..748 CDD:412064 21/122 (17%)
RhoGAP_p190 1411..1611 CDD:239838
AT5G12150NP_196776.1 PH 19..116 CDD:459697
RhoGAP 181..325 CDD:459875 29/181 (16%)
COG4913 <566..>729 CDD:443941 26/164 (16%)
Lzipper-MIP1 600..678 CDD:464163 19/119 (16%)
Blue background indicates that the domain is not in the aligned region.

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