DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and DBP8

DIOPT Version :10

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_012039.1 Gene:DBP8 / 856574 SGDID:S000001212 Length:431 Species:Saccharomyces cerevisiae


Alignment Length:391 Identity:121/391 - (30%)
Similarity:193/391 - (49%) Gaps:29/391 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 FAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNK 138
            |....|||...::|...|...||.:|:..|...|:|:|.:|.|.||||||:||..|:|     .|
Yeast     4 FKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPML-----TK 63

  Fly   139 WSR-TDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMD-QCNILICTP 201
            ||. ..|:..::::||||||.||.|....:|...:....:|:||:::..:...:. :.:.:|.||
Yeast    64 WSEDPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATP 128

  Fly   202 GRLLQHM---DENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPP--VRQTLLFSATQTN 261
            |||..|:   .::.:......:.|||||||..|...|...|.:.|...||  .||||||:||.|:
Yeast   129 GRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITD 193

  Fly   262 TVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSF 326
            .|:.|...    ||..|        :|.....:..:...:|:|..|:..|:::....|...|:..
Yeast   194 QVKSLQNA----PVQKG--------KPPLFAYQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQL 246

  Fly   327 I--KNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMF 389
            :  :.:..:..|:||.....|:.|.....:|.  ..:.:|:..:.|..|......|...:..::.
Yeast   247 LTCEEYENKTAIIFVNRTMTAEILRRTLKQLE--VRVASLHSQMPQQERTNSLHRFRANAARILI 309

  Fly   390 STDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQL 454
            :|||||||||.|.|..||..|.|.|...:|||:||:||....|:.:..:| ..:...|.|:::::
Yeast   310 ATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFVT-QRDVSRIQAIEDRI 373

  Fly   455 N 455
            |
Yeast   374 N 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 SrmB 71..493 CDD:440279 121/391 (31%)
DEADc_DDX10 83..279 CDD:350699 71/202 (35%)
DUF4217 474..530 CDD:464056
DBP8NP_012039.1 SrmB 1..428 CDD:440279 121/391 (31%)
Blue background indicates that the domain is not in the aligned region.

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