Protein Alignment CG5800 and RRP3

DIOPT Version :10

• Sequence 1: NP_573230.1
• Gene: CG5800 / 32742
• FlyBaseID: FBgn0030855
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_011932.2
• Gene: RRP3 / 856462
• SGDID: S000001107
• Length: 501
• Species: Saccharomyces cerevisiae
• Alignment Length: 456
• Identity: 144/456 - (31%)
• Similarity: 235/456 - (51%)
• Gaps: 40/456 - (8%)

  Fly    27 GGGRKSGDNSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESK 91
            ||.....:......::::.||:..:| ...|:..|...|    :.:.|::..|..:..:|.....
Yeast    41 GGSESDSEEDATAEKKKVLKSKSKST-VSTQNENTNEDE----SFESFSELNLVPELIQACKNLN 100

  Fly    92 FVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTREL 156
            :..||.:|..:|.|||:|.|::|.|.||||||.||.||:|..|    |...:...|.|::|||||
Yeast   101 YSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL----WHDQEPYYACILAPTREL 161

  Fly   157 AYQIFETLKKVGKHHDFSAGLIIGGKNLKFE-RTRMDQCNILICTPGRLLQHMDENPLFNTSTME 220
            |.||.||...:|......:..|:||.|:..: |..|.:.:|:|.|||||:.|::....|:...::
Yeast   162 AQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLK 226

  Fly   221 MLVLDEADRCLDMGFQKTLNSIIENFP-PVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATP 284
            .||:|||||.|||.|...|:.|::..| ..|.|.|||||.|:.:..|.|.:|.:||
Yeast   227 FLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPV--------- 282

  Fly   285 REEPSASTK-KTPNTAV---LAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQA 345
              :.:.|.| :|.:|.|   :.||..|:.:|::..|.:           .:.:.:|:|..:...|
Yeast   283 --KCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNE-----------FIGKTMIIFTRTKANA 334

  Fly   346 KYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLD 410
            :.|..: |.|...| ..||:|.|:|::|:...:.|......::.:||||:||||.|:|:.||..|
Yeast   335 ERLSGL-CNLLEFS-ATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYD 397

  Fly   411 CPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKI 475
            .|.|...||||.||:||....|:.:.:::..:.| :|..::|.|...:....:|...:.:.|..:
Yeast   398 IPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLE-LILRIEEVLGKKLPKESVDKNIILTLRDSV 461

  Fly   476 E 476
            :
Yeast   462 D 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5800	NP_573230.1	SrmB	71..493	CDD:440279	136/412 (33%)
		DEADc_DDX10	83..279	CDD:350699	80/197 (41%)
		DUF4217	474..530	CDD:464056	0/3 (0%)
RRP3	NP_011932.2	SrmB	82..489	CDD:440279	136/410 (33%)