DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and AT5G65900

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_201391.1 Gene:AT5G65900 / 836719 AraportID:AT5G65900 Length:633 Species:Arabidopsis thaliana


Alignment Length:517 Identity:183/517 - (35%)
Similarity:296/517 - (57%) Gaps:28/517 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DNSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDATAI---KKFAQFPLSKKTQKALAESKFVHP 95
            :..:|:.:::...:...:.|.|::| |.:..:::.|:|   |.|....||..|.|::.|..|...
plant   114 EEPKKKKKKQRKDTEAKSEEEEVED-KEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARM 177

  Fly    96 TQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQI 160
            ||:|..:|.|.:.|:||||||.||||||||||||.:|.|:..|::..:|.|.::|.||||||.|.
plant   178 TQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQS 242

  Fly   161 FETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDENPLFNTSTMEMLVL 224
            :...|::.|:|..:.|.:|||:..|.|...:.: .|:|:.||||||.|::....|....::.||:
plant   243 YGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVM 307

  Fly   225 DEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPS 289
            |||||.|:..|::.|..|:...|..|||.||||||:..|:||||::|..|||:         :..
plant   308 DEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYI---------DVD 363

  Fly   290 ASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL-KQKIIVFVASCKQAKYLYEIFC 353
            ...|:..|       |.|:|.|.|:....::..|.:|:|... |:||:||.::||..|:..|:|.
plant   364 EGRKEVTN-------EGLEQGYCVVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFR 421

  Fly   354 KLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQY 418
            .::  ...|.:.|.:.|::|...:..|::....::..|:||:||||||.|:|:||.|.|::.:.|
plant   422 YIK--FDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDY 484

  Fly   419 IHRAGRSARNK-TRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQF 482
            |||.||:||.: .:|:.||||||.|.:: |..|| ...|.:...:.:.|||...:..:|..:::.
plant   485 IHRVGRTARGEGAKGKALLVLTPQELKF-IQYLK-AAKIPVEEHEFEEKKLLDVKPFVENLISEN 547

  Fly   483 PELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPF-LEKFLWRQKQ 543
            ..|:.:|:.|:.:||........|.:|||..|:|...|.|.|.:..|:|.. :::..:|.|:
plant   548 YALKESAKEAYKTYISGYDSHSMKDVFNVHQLNLTEVATSFGFSDPPKVALKIDRGGYRSKR 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 164/442 (37%)
DEADc 74..277 CDD:238167 92/203 (45%)
HELICc 311..437 CDD:238034 45/127 (35%)
DUF4217 474..530 CDD:290667 15/55 (27%)
AT5G65900NP_201391.1 DEADc 156..360 CDD:238167 92/203 (45%)
DEXDc 169..376 CDD:214692 92/222 (41%)
HELICc 374..504 CDD:238034 47/131 (36%)
DUF4217 536..595 CDD:290667 15/58 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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