DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and AT5G54910

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_200302.1 Gene:AT5G54910 / 835582 AraportID:AT5G54910 Length:739 Species:Arabidopsis thaliana


Alignment Length:818 Identity:306/818 - (37%)
Similarity:459/818 - (56%) Gaps:140/818 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KPGSRFKPGSGTFKGAGGGRKSGDNSQKRP---RQEINKSRLAATEAEIQDLKTKYAEIDATAIK 72
            ||.|.|.|.|                 .||   ..:|.||.    :.:...:.::||     .::
plant    33 KPDSGFNPLS-----------------LRPLPKDSKIGKSE----DGKNGTVFSRYA-----GVR 71

  Fly    73 KFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMN 137
            ||||.|:|.||::.|.::|:|..|.||..:|..||.|:|:||||.|||||||||:||:||.|...
plant    72 KFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRE 136

  Fly   138 KWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGK-NLKFERTRMDQCNILICTP 201
            :||..||||.||||||||||.|.|..|.||||.|.|||||:|||: .:..|:.|:.:.|||:|.|
plant   137 RWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAP 201

  Fly   202 GRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDL 266
            |||||||||.|.|....:::|:||||||.||..|:..|:.||...|..|||||||||||..|:||
plant   202 GRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDL 266

  Fly   267 ARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL 331
            |||:|:||.|:....                .||.|.|..|.|:.:::.:|.|:.|||||||.||
plant   267 ARLSLRDPEYISVHA----------------EAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHL 315

  Fly   332 KQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASR 396
            ..:|:||:::.||.|:::|.|.|||||.||.:|:|.:.|::|:.:|..|:.:.. |:|.|||.:|
plant   316 NSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQS-VLFCTDVLAR 379

  Fly   397 GLDF-PAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRC 460
            |||| .||:||||:||||||:.||||.||:||..|:|:.||.||||||: ||..|:| ..:.|:.
plant   380 GLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEK-MIEKLQE-AKVPIKL 442

  Fly   461 VQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGL 525
            ::.:.:||......:.|.|.::|:|:..|||||::|::|:...|:|.:|:|..|.::.|:.||||
plant   443 IKANNQKLQEVSRLLAALLVKYPDLQGVAQRAFITYLRSIHKRRDKEIFDVSKLSIENFSASLGL 507

  Fly   526 AVTPRVPFLEKFLWRQKQLQQQKEQG----------DNAKSIN-PLLSKLTKQQSFGGGDEDEEN 579
            .:|||:.|..         .:.|::|          :||:... ||   :.|:...|      |:
plant   508 PMTPRIRFTN---------LKTKKKGVYESSIAMEIENAQEYEAPL---VVKKDLLG------ED 554

  Fly   580 SDDEDFIKVKRKDHDVEGEPVKLDEEDDTENEAEAPLVVPKREKLVTKASLAKKALKKNLQ--VN 642
            .::|||....||    ||:.|    |..|:.|   .:::|...      .|..|.||.||.  ..
plant   555 LEEEDFALKPRK----EGKVV----EKSTKEE---EVLIPGNR------VLKNKKLKINLHRPFG 602

  Fly   643 SKLKFDDEGETMADDRSQMKALSARQRTVNQDDDD------GGINLVLSKALLTEEDQYDKQRFR 701
            |::..|:||.::|    .:.:::|...|....|::      ..:...:.||.: |:.:.||:|  
plant   603 SRVVLDEEGNSLA----PLASVAAEAGTEVALDEERMNDYYKKVGAEMRKADI-EDKKVDKER-- 660

  Fly   702 ELVKKRHKLQREKLRKKAEEAKGSDDEEEQQDDDNADDAGSESDHSVDLSWLPDPDKVYKNKPNA 766
                :|.|..::|:::|    :|:.::||::::::.|.:||..|.                    
plant   661 ----RREKRMKQKIKRK----RGAMEDEEEEEEEDHDGSGSSDDE-------------------- 697

  Fly   767 SDRNESKSESSDASDDEKADDSDGDDDDVSD-DEPAYK 803
            :.||..:::...:.::|.....:.|...|:| :|.|.|
plant   698 TGRNSKRAKKIVSDNEENGGKINTDSLSVADLEEMALK 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 220/464 (47%)
DEADc 74..277 CDD:238167 120/203 (59%)
HELICc 311..437 CDD:238034 65/126 (52%)
DUF4217 474..530 CDD:290667 22/55 (40%)
AT5G54910NP_200302.1 SrmB 70..526 CDD:223587 234/483 (48%)
DEADc_DDX10 82..280 CDD:350699 115/197 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 197 1.000 Domainoid score I892
eggNOG 1 0.900 - - E2759_KOG0343
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 461 1.000 Inparanoid score I367
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 1 1.000 - - FOG0005116
OrthoInspector 1 1.000 - - oto3509
orthoMCL 1 0.900 - - OOG6_102138
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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