DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and AT5G05450

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_196164.1 Gene:AT5G05450 / 830428 AraportID:AT5G05450 Length:593 Species:Arabidopsis thaliana


Alignment Length:641 Identity:199/641 - (31%)
Similarity:301/641 - (46%) Gaps:133/641 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 INKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQ 108
            |||   |.||....||:.                |||....:||.:|.|...|.||..:|.....
plant     7 INK---ALTETRFSDLEP----------------PLSGDIIEALNQSDFEFCTPVQAATIPLLCS 52

  Fly   109 GKDVLGAAITGSGKTLAFLIPVLEHL-----FMNKWSRTDGVGAIIISPTRELAYQIFETLKK-V 167
            .|||...|.|||||||||::|::|.|     |..|..:..||   ||||||||:.||:...:. |
plant    53 YKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGV---IISPTRELSTQIYNVAQPFV 114

  Fly   168 GKHHDFSAGLIIGGKNLKFERTRMDQ--CNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRC 230
            ....:.::.|::||:.:|.:...:::  ||:||.|||||...|:...:.:...:|:|:||||||.
plant   115 STLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRL 179

  Fly   231 LDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSAST-KK 294
            |:||||:.:|.||...|..|:|.|||||||..|::||:..|::||.|.....:..|.....| .|
plant   180 LEMGFQRQVNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSK 244

  Fly   295 TPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKL--RP 357
            ||:.        |...|:....:.|.:.|...:..:..:|:|||..:|....|...:..|:  ..
plant   245 TPSG--------LHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALK 301

  Fly   358 GSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRA 422
            ...|:.::|.:.|:.|......|.:.|...:..||||:||||.|.:::|||.|.|:|.:.:.|||
plant   302 SISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRA 366

  Fly   423 GRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRA 487
            ||:||...:|..::.|.|.||.|:     |.:.  ||.|.::.:|.......:      .|.:|:
plant   367 GRTARLGRQGRAIVFLLPKEEAYV-----EFMR--IRRVPLEERKCSEDASDV------IPIIRS 418

  Fly   488 TAQ----------RAFLSYIKSV------FLMRNKRLFNVFSLDLDAFAQSLGLAVTP------- 529
            .|.          :||:|::::.      |:.|.|      .|::...|...||...|       
plant   419 AAMKDRAVMEKGLKAFVSFVRAYKEHHCSFIFRWK------DLEIGKLAMGYGLLYLPSMSEVKQ 477

  Fly   530 -----------------RVPFLEKFLWRQKQLQQ------------QKEQG-----DNAKSINPL 560
                             .:.|.:|:  |:||.||            :||:|     |.:.|.:|.
plant   478 HRLSSEGFTPVEGVKFEEIKFKDKY--REKQRQQNLQVRKEKRQEEKKEKGKRKRVDASASNDPK 540

  Fly   561 LS--KLT-KQQSFGGGDEDEENSDDEDF---IKVKR---KDHDVEGEPVKLDEEDD 607
            .:  ||| ||:......||||.. |.|:   ||||:   |:.:.|    :|..:||
plant   541 KASRKLTGKQRQTIQTAEDEEVM-DRDYKLMIKVKKGLIKEDEYE----RLTGDDD 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 152/437 (35%)
DEADc 74..277 CDD:238167 88/210 (42%)
HELICc 311..437 CDD:238034 39/127 (31%)
DUF4217 474..530 CDD:290667 14/95 (15%)
AT5G05450NP_196164.1 SrmB 12..501 CDD:223587 163/534 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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