DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and AT4G34910

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_195217.1 Gene:AT4G34910 / 829643 AraportID:AT4G34910 Length:626 Species:Arabidopsis thaliana


Alignment Length:652 Identity:167/652 - (25%)
Similarity:260/652 - (39%) Gaps:150/652 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RPRQEINKSRL----AATEAEIQ--DLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQ 97
            :|.:::|...:    .|.|.|.|  |.:.:..:.:..|.|.|.:..|..:..:||.:.....||.
plant     7 KPVEDVNSEVVDEVEKAEEVEEQRNDREQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTL 71

  Fly    98 VQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGV-------GAIIISPTRE 155
            :|:.:|...|:||||:..|.||||||||:|:|:|:.||     ..|.|       .|.|:.|:||
plant    72 IQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLF-----SADSVSKKKLAPSAFILVPSRE 131

  Fly   156 LAYQIFE-----------TLKKVGKHHDFSAGLIIGGKNLKFERTRMDQCN-------ILICTPG 202
            |..|::.           .||.|......||.               |..|       ||:.||.
plant   132 LCQQVYTEVSSLIELCRVQLKAVQLTSSMSAS---------------DMRNALAGLPEILVSTPA 181

  Fly   203 RLLQHMDENPLFNTSTME---MLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQ 264
            .:.:......|..|:..|   :|||||||..|..|::..|.|:....|...|.||.|||.::.|:
plant   182 CIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSIIPRRCQCLLMSATTSSDVE 246

  Fly   265 DLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKN 329
            .|.:|.|.:|:.:.......:||              |||..:||.::..:.:||:..:.:.:|.
plant   247 KLKKLILHNPIVLTLTEDNDKEE--------------AVPSNVQQFWISCSAQDKLLHILALLKL 297

  Fly   330 HLKQ-KIIVFVASCK---QAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFS 390
            .:.| ||::|:.:..   :.|...|.|     |.....|.|.|.|:.|:.|.|.|.......:.:
plant   298 EVVQKKILIFINTIDMGFRLKLFLEKF-----GIKSAILNGELPQNSRLHILEQFNAGLFDYLIA 357

  Fly   391 TDVAS-----------------------------------RGLDFPAVNWVVQLDCPEDVSQYIH 420
            ||..|                                   ||:||..|:.|:..|.|:.|:.|||
plant   358 TDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVHTVINFDMPQSVTGYIH 422

  Fly   421 RAGRSARNKTRGECLLVLTPSEE---EYMISALKEQLNIDIRCVQIDP----KKLFSPRVKIEAF 478
            |.||:.|..:.|..:.:::|.|.   |.:.|.|....|.||..:...|    ..:.|.|.:.|..
plant   423 RIGRTGRAYSSGSSVSLISPDEMEGFEDIKSFLASDKNKDIDIITPFPLLTENAVESLRYRAEDV 487

  Fly   479 LAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLE---KFLWR 540
            .....::.....||.....:.:...:.|..|.....|||.......|:.|...|.|:   ::|..
plant   488 AKSVTKIAVRESRAQDLRNEIINSEKLKAHFEANPRDLDLLRHDKPLSKTAPAPHLKDIPEYLVD 552

  Fly   541 QKQLQQQKEQGDNAKSINPLLSKLTK------QQSFGGGDEDEENSDDEDFIKVKRKDHDVEGEP 599
            .|..:..|            :.||.:      ::|.|||..:.:|.      |..||..|    |
plant   553 AKTQEASK------------MVKLARAAMGNTRRSGGGGGRNNKNK------KRSRKGSD----P 595

  Fly   600 VK 601
            :|
plant   596 LK 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 137/511 (27%)
DEADc 74..277 CDD:238167 73/230 (32%)
HELICc 311..437 CDD:238034 39/164 (24%)
DUF4217 474..530 CDD:290667 10/55 (18%)
AT4G34910NP_195217.1 SrmB 45..539 CDD:223587 141/532 (27%)
DEADc_DDX56 53..261 CDD:350719 72/227 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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