DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and AT3G16840

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001326753.1 Gene:AT3G16840 / 820937 AraportID:AT3G16840 Length:827 Species:Arabidopsis thaliana


Alignment Length:737 Identity:177/737 - (24%)
Similarity:297/737 - (40%) Gaps:183/737 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RKSGDNSQKRPRQEINKSRLAATEAEIQDLK---------TKYAEIDATAI----KKFAQFPLSK 81
            :|:..|.:|:..::..|.:.....|:.||..         |...:::...|    ..::...|..
plant   136 KKAKRNKEKKKEKKKKKQKKINEAAKNQDASAAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHP 200

  Fly    82 KTQKALAESKFVHPTQVQRDSIG-PALQGKDVLGAAITGSGKTLAFLIPVLEHLF---------- 135
            ...|::....|..||::|:.... .|.|||||:|||.|||||||||.:|:|:.|.          
plant   201 LLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLY 265

  Fly   136 ------MNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGK-NLKFERTRMDQ 193
                  ..|::....:.|:||:||||||.|:.|.|:...|:.......|:||. :.|.||...::
plant   266 ALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEK 330

  Fly   194 CNILICTPGRLLQHMD--ENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPV------- 249
            ..|::.|||||.:.|.  |..|....::...|||||||.::.|..:.|.||::..|..       
plant   331 PEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGK 395

  Fly   250 -----------------RQTLLFSAT------------------------QTNTVQDLA-RLNLK 272
                             |||.:||||                        :.|:::.|: |..::
plant   396 TQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMR 460

  Fly   273 DPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIV 337
            |.|.:               .....|::|| |: :::|::....::|...|:..:..|.:.:.||
plant   461 DNVAI---------------IDLTTTSILA-PK-IEESFIKCEEKEKDAYLYYILSVHGQGRTIV 508

  Fly   338 FVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPA 402
            |..|....:::..:...|  |..:..|:..:.|..|:...:.|....:.::.:||:.:||:|...
plant   509 FCTSVTDLRHISGLLKIL--GLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKN 571

  Fly   403 VNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDP-K 466
            |..::....|.....|:||.||:||....|..:.::.|:|.....:..|   :..:..|:|.| .
plant   572 VRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCK---SFSMESVKIFPLD 633

  Fly   467 KLFSPRVKIEAFLA-QFPEL-----RATAQRAFL-SYIKSVFL------MRNKRLFNV-----FS 513
            ..:.|.|:...:|| |..|:     |..|.|.:| .:.:|:.|      ...:|:.||     .|
plant   634 NSYMPAVRKRLYLARQIYEIERKGSRENADRTWLKKHAESMELELDDEESEEERVDNVRQRKATS 698

  Fly   514 LDLDAFAQSL---------------------GLAVTPRVPFLEKFLWRQKQLQQQKEQGD----- 552
            ..|:...:.|                     |::...:..|:|  |.:|||.|.| ..||     
plant   699 ARLNKLKEELSTLLSHPMQPKKFSGRYFAGVGVSTLMQNQFVE--LKKQKQAQMQ-IGGDIKRRK 760

  Fly   553 ----NAKSINPLLSKLTKQQSFGGGDE-------DEENSDDEDFIKVKRKDHDVEGEPVKLDEED 606
                |...|.||      |....||:|       ..|...|...:|.|||:.       |:...|
plant   761 LVVINQNCIEPL------QALRAGGNEMLKMKGQSAEKRRDIASLKKKRKEE-------KIGRRD 812

  Fly   607 DTENEAEAPLVVPKREKLVTKA 628
            ...|:       .|:.||:..:
plant   813 QRRNQ-------KKQRKLMASS 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 128/523 (24%)
DEADc 74..277 CDD:238167 80/271 (30%)
HELICc 311..437 CDD:238034 28/125 (22%)
DUF4217 474..530 CDD:290667 17/94 (18%)
AT3G16840NP_001326753.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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