DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and Ddx55

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_080685.2 Gene:Ddx55 / 67848 MGIID:1915098 Length:600 Species:Mus musculus


Alignment Length:647 Identity:197/647 - (30%)
Similarity:310/647 - (47%) Gaps:116/647 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 QFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWS 140
            |.||..:...||.|..|.|.|.||..:|...::.|||...|:|||||||||:||:||.|...:..
Mouse    13 QVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEK 77

  Fly   141 -RTDGVGAIIISPTRELAYQIFETLKKVGKHH-DFSAGLIIGGKN--LKFERTRMDQCNILICTP 201
             :.:.||||:|:||||||.||.|.|....||. .||..|.|||:|  ...||.:....||::.||
Mouse    78 LKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGGRNPGEDVERFKQHGGNIIVATP 142

  Fly   202 GRLLQHMDENPLFN-----------TSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLF 255
            |||      ..:|.           ..::::||||||||.|||||:.::|:|:|..|..|:|.||
Mouse   143 GRL------EDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLF 201

  Fly   256 SATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKI 320
            |||||..|::|.|..|::||.:   ....:...::||:|||:.        |:..|::...::|.
Mouse   202 SATQTQEVENLVRAGLRNPVRI---SVKEKGVAASSTQKTPSR--------LENHYMICKADEKF 255

  Fly   321 TMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSH 385
            ..|..|:::..::|.:||.::|...:|..:....|.....:|.::|.: :.:|..|:.:|.:...
Mouse   256 NQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKM-KYKRNKIFMEFRKLQS 319

  Fly   386 VVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISAL 450
            .::..|||.:||:|.|.||||:|.|.|.:.|.::||.||:||....|..|:.|.|.||.|:    
Mouse   320 GILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEAYI---- 380

  Fly   451 KEQLNIDIRCVQIDP-KKLFSPRVKIEAFLAQFPELRATA----------QRAFLSYIKSVFLMR 504
             ..|.|:.:|    | :::...|..|:.    .|:|||.|          .:||:|::::.....
Mouse   381 -NFLAINQKC----PLQEMSLQRNTIDL----LPKLRAMALADRAVFEKGMKAFVSFVQAYAKHE 436

  Fly   505 NKRLFNVFSLDLDAFAQSLGLAVTPR---------------------VPFLEKFLWRQKQLQQQK 548
            ...:|.:..||....|:...|...||                     :||.:|.  |:||.|:..
Mouse   437 CSLIFRLKDLDFAGLARGFALLRMPRMPELRGKQFPDFVPVDIDTDTIPFKDKI--REKQRQKLL 499

  Fly   549 EQGDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKVKRKDHDVEGEPVKLDEEDDTENEAE 613
            ||....:|.|....|..|.:::   .:.:...:.:..:..|||    :.|...:|:||       
Mouse   500 EQKRKERSENEGRKKFIKNKAW---SKQKAKKERKKKMNAKRK----KDEGSDIDDED------- 550

  Fly   614 APLVVPKREKLVTKASLAKKALKKNLQVNSKLKFDDEGETMADDRSQMKALSARQRTVNQDD 675
                   .|:|:....|.||..|..:               .::..:...|::.:|||...|
Mouse   551 -------MEELLNDTRLLKKFKKGKI---------------TEEEFEKGLLTSAKRTVQLTD 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 149/410 (36%)
DEADc 74..277 CDD:238167 96/215 (45%)
HELICc 311..437 CDD:238034 38/125 (30%)
DUF4217 474..530 CDD:290667 14/65 (22%)
Ddx55NP_080685.2 DEADc 9..224 CDD:238167 96/219 (44%)
Q motif 9..37 10/23 (43%)
DEXDc 24..228 CDD:214692 92/212 (43%)
DEAD box 171..174 2/2 (100%)
Helicase_C 252..363 CDD:278689 35/111 (32%)
DUF4217 403..462 CDD:290667 13/62 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 499..551 13/72 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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