DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and ddx10

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001096151.1 Gene:ddx10 / 613047 XenbaseID:XB-GENE-985914 Length:852 Species:Xenopus tropicalis


Alignment Length:858 Identity:378/858 - (44%)
Similarity:523/858 - (60%) Gaps:110/858 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KSGDNSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHP 95
            ||.....|:|..::.|.       .|..|:.:|:||:.:.|.||:.|||||||.:.|.|.::..|
 Frog    39 KSHRKQNKKPEWQVEKE-------TITRLEQRYSEINTSEIVKFSDFPLSKKTLRGLVEGQYRLP 96

  Fly    96 TQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQI 160
            |::|:.:||.|||||||||||.|||||||||:||.||.|:..:|:..||:|.:|||||||||||.
 Frog    97 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFIIPALECLYRQQWTSDDGLGVLIISPTRELAYQT 161

  Fly   161 FETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQCNILICTPGRLLQHMDENPLFNTSTMEMLVLD 225
            ||.|:|||::|:|||||:||||:||.|...:.:.||||||||||||||||...|:.|.::|||||
 Frog   162 FEVLRKVGRNHEFSAGLVIGGKDLKQETACIHRTNILICTPGRLLQHMDETSTFHASNLQMLVLD 226

  Fly   226 EADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSA 290
            ||||.|||||..|:|:|:||.|..|||||||||||.:|:|||||:||||.||.            
 Frog   227 EADRILDMGFADTMNAIVENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVW------------ 279

  Fly   291 STKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKL 355
                ....|..:.|..|:|:|||..|:.||.:|:|||:||||:|.|||.:|||:.:||:..||:|
 Frog   280 ----VHENAKFSTPATLEQNYVVCELQQKINLLYSFIRNHLKKKSIVFFSSCKEVQYLFRAFCRL 340

  Fly   356 RPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIH 420
            |||.|:|.|:|...|.:|:.:|.||:||...|:|:||:|:|||||||||||:|||||||.:.|||
 Frog   341 RPGIPVLVLHGKQQQMKRMEVYNDFIRKKSAVLFATDIAARGLDFPAVNWVLQLDCPEDANTYIH 405

  Fly   421 RAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPEL 485
            |.||:||.|..||.||||.|||.:.|...|:|: .:.|..::|:|:||...:.::||||||..:|
 Frog   406 RVGRTARYKEGGEALLVLLPSEVKGMFKQLEEK-KVPINEIKINPEKLMDVQGRLEAFLAQEQDL 469

  Fly   486 RATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQ 550
            :.||||.|:||::||:||:||.:|:||.|.|..:||||||||.|||.||.|....|.....:.:.
 Frog   470 KETAQRCFVSYLRSVYLMKNKEVFDVFKLPLTQYAQSLGLAVAPRVRFLLKAQNAQSTSVSKDDP 534

  Fly   551 G------------------------DNAKSINPL----------------LSKLTKQQS--FGGG 573
            |                        |:|.::|..                ||...||.|  |...
 Frog   535 GTASDQEIEAFKSKLGGKPADDQSRDDADNVNSSEEESNLEEDSEDDEQELSDNLKQTSLQFMNE 599

  Fly   574 DEDEENSDDEDFIKVKRKDHDVEGEPVKLDEEDDTENEAEAPLVVPKREKLVTKASLAKKALKKN 638
            |||:::..|.||:.|||:  ||.|     .|:.....|.|......|:.:.|:||..|||.|||.
 Frog   600 DEDDDDCRDLDFLTVKRR--DVFG-----IEDGSFIPETEMTKSKLKKTEKVSKAKEAKKVLKKK 657

  Fly   639 LQVNSKLKFDDEGETMADDRSQMKALSARQRTVNQDDDDGGINLVLSKALLTEEDQYDKQRFREL 703
            .|||:|:.|.|:||.: ....|::..:.::  ..::||..||||..:|..|.|||::||:.:|..
 Frog   658 FQVNTKIVFADDGEVI-QQWPQIQKTTVKE--TEEEDDSSGINLAKAKERLNEEDRFDKEAYRMK 719

  Fly   704 VKKRHKLQREKLRKKAEEAKGSDDEEEQQDDDNA--DDAGSESDHSVDLSWLPDPDKVYKN---- 762
            :|::|:  .::|::||.....:..|.|::|:..|  |..|||.:  :|:|.|||||| |::    
 Frog   720 IKEKHR--EKRLKEKAARRAANKKESEEEDEAVAYLDHDGSEDE--LDISALPDPDK-YRDMEES 779

  Fly   763 -----KPNASDRNES--KSESSDASDDEKADDSDG--------DDDDVSDDEPAYKKSKLTNKMT 812
                 :.:|||..|.  |..:..:....:|:.|.|        :.|:  |.||      |...::
 Frog   780 DGGSAQESASDHEEERPKKRTYQSLAGNQAEKSVGIKKKRAKQNSDE--DFEP------LNTGLS 836

  Fly   813 LMDTEAIAASLLG 825
            |.:.|.:...|||
 Frog   837 LAEDEELVLHLLG 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 240/439 (55%)
DEADc 74..277 CDD:238167 133/202 (66%)
HELICc 311..437 CDD:238034 75/125 (60%)
DUF4217 474..530 CDD:290667 33/55 (60%)
ddx10NP_001096151.1 SrmB 52..564 CDD:223587 279/535 (52%)
60KD_IMP <704..798 CDD:321001 33/98 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 236 1.000 Domainoid score I2301
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20922
Inparanoid 1 1.050 631 1.000 Inparanoid score I834
OMA 1 1.010 - - QHG46503
OrthoDB 1 1.010 - - D218522at33208
OrthoFinder 1 1.000 - - FOG0005116
OrthoInspector 1 1.000 - - oto103845
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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