DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and ddx10

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_001922220.1 Gene:ddx10 / 569118 ZFINID:ZDB-GENE-071022-2 Length:864 Species:Danio rerio


Alignment Length:882 Identity:395/882 - (44%)
Similarity:538/882 - (60%) Gaps:129/882 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RKSGDNSQKRPRQEINKSRLAATEAEIQDLK---TKYAEIDATAIKKFAQFPLSKKTQKALAESK 91
            :|......|..|.:.:|.:....|.|.:::|   .||:||:.....||:.|||||||.|.|.|::
Zfish    25 KKYAKTKTKVKRSQKSKVKKRDWEVERENIKKLVDKYSEINPKEAVKFSDFPLSKKTLKGLLEAQ 89

  Fly    92 FVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTREL 156
            :..||::||.:||.||||:||||||.|||||||||||||||.|:..:|:..||:||:||||||||
Zfish    90 YRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECLYREQWTAMDGLGALIISPTREL 154

  Fly   157 AYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQCNILICTPGRLLQHMDENPLFNTSTMEM 221
            |||.||.|:||||:|:|||||:||||:||.|..::.:.||:|||||||||||||...|:.|.:.|
Zfish   155 AYQTFEVLRKVGKNHEFSAGLVIGGKDLKDESEKIHRTNIIICTPGRLLQHMDETATFHASDLHM 219

  Fly   222 LVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPRE 286
            ||||||||.|||||..|||:|:||.|..|||||||||||.:|:|||||:||||.||..     .|
Zfish   220 LVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSATQTRSVKDLARLSLKDPEYVWV-----HE 279

  Fly   287 EPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEI 351
            :...||           |..|:|:|||..|..|:.||:||:::||::|||||.|.||:.:||:.|
Zfish   280 QAKFST-----------PATLEQNYVVCELHQKVNMLYSFLRSHLQKKIIVFFACCKEVQYLFRI 333

  Fly   352 FCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVS 416
            ||:||||..:|||:|...|.:|:.:|.||:||:..|:|:||:|:|||||||||||:|.|||||.:
Zfish   334 FCRLRPGISVLALHGKQQQMKRVEVYNDFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDAN 398

  Fly   417 QYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQ 481
            .||||.||:||.|..||.||||.||||:.|||.|:|: .:.|..:|::|:||.|.:.|:||||||
Zfish   399 TYIHRVGRTARYKEGGEALLVLLPSEEKGMISQLQEK-KVPINKIQVNPEKLMSVQQKLEAFLAQ 462

  Fly   482 FPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQK---- 542
            ..|.:..|||.|:||::||:||:||.:|:|..|.|..:|.||||||.|||.||.|...:::    
Zfish   463 EKEQKERAQRCFVSYLRSVYLMKNKDVFDVLQLKLPEYAMSLGLAVAPRVRFLLKAQQQRRTAAQ 527

  Fly   543 -------------------QLQQQKEQGDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKV 588
                               ||||||.:.:.::|         :::.....|:||.:.||||.   
Zfish   528 DDSSTAGHQSEDELQSFTAQLQQQKTKSEPSQS---------EEEEDDDDDDDEGDDDDEDI--- 580

  Fly   589 KRKDHDVEGEPVKL----DEEDDTENEAEAPLVVPK-----------------------REKLVT 626
              ||.| ..:|:.|    :||||.:::.||.|:..|                       |::..:
Zfish   581 --KDQD-SLKPLSLLCGFNEEDDDDDQREADLLTVKCKDVFNVKEEIKDEEDADADAKNRKQKES 642

  Fly   627 KASLAKKALKKNLQVNSKLKFDDEGETMADDRSQMKALSARQRTV---NQDDDD--GGINLVLSK 686
            |...|||..|:||:||:|..|.::|:.:    .|...|   ||||   .:||||  .|||:..:|
Zfish   643 KFKDAKKIQKRNLKVNTKKVFTEDGKVV----QQWPPL---QRTVVPDEEDDDDVMTGINVEAAK 700

  Fly   687 ALLTEEDQ-YDKQRFRELVKKRHKLQREKLRKKAEEAKGSDDEEEQQ----DDDNADDAGSE--- 743
            ..|..||| :||..:|..:|::|:.:|.|.:....||.....||:::    ||||.||...|   
Zfish   701 ERLRREDQAFDKMEYRRKIKEKHREKRLKEKAARREASKQHKEEKRKADGDDDDNDDDEDEEEVV 765

  Fly   744 -----SDHSVDLSWLPDPDKVYKNKPNASDRNESKSESSDASDDEK---ADDSDGDDDDVSDDEP 800
                 :|...|.|.|||||||:.     |:.:|...|||||...::   ::|.|.||||..|:|.
Zfish   766 AYLSGADEEFDPSTLPDPDKVHN-----SESSEEDGESSDAGGKKRSFSSEDEDDDDDDDDDEEQ 825

  Fly   801 AYKKSK-----------LTNKMTLMDTEAIAASLLGS 826
            ..:||:           |...::|.:.|.:...||.|
Zfish   826 TTQKSRKKPRTEPTVTALDTGLSLAEDEELVLHLLSS 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 248/443 (56%)
DEADc 74..277 CDD:238167 138/202 (68%)
HELICc 311..437 CDD:238034 73/125 (58%)
DUF4217 474..530 CDD:290667 31/55 (56%)
ddx10XP_001922220.1 DEADc 72..276 CDD:238167 139/203 (68%)
DEXDc 90..275 CDD:214692 127/184 (69%)
HELICc 289..419 CDD:238034 75/129 (58%)
DUF4217 452..511 CDD:290667 31/58 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578433
Domainoid 1 1.000 241 1.000 Domainoid score I2206
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20922
Inparanoid 1 1.050 650 1.000 Inparanoid score I777
OMA 1 1.010 - - QHG46503
OrthoDB 1 1.010 - - D218522at33208
OrthoFinder 1 1.000 - - FOG0005116
OrthoInspector 1 1.000 - - oto40040
orthoMCL 1 0.900 - - OOG6_102138
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R291
SonicParanoid 1 1.000 - - X3635
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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