DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and CG7878

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster


Alignment Length:532 Identity:147/532 - (27%)
Similarity:235/532 - (44%) Gaps:115/532 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FKGAGGGRKSGDNSQKRPR-----------------QEINKSRLAATEA---------------- 54
            :.|.|..|..|::.:..|.                 :.:||:.:|||.|                
  Fly   175 YDGGGYDRYKGNSYEFNPTSSESNKDNGDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEA 239

  Fly    55 ---------EIQDLKTKYAEIDATAI--------------------KKFAQFPLSKKTQKALAES 90
                     ||:.::.:..:|..:.:                    :.||::|   ...:.:.:.
  Fly   240 PEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFAEYP---DMLEEITKM 301

  Fly    91 KFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSR--TDGVGAIIISPT 153
            .|..|:.:|..:....|||.|::|.|.||:|||||||:|.:.|.......|  ..|...::::||
  Fly   302 GFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPT 366

  Fly   154 RELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDENPLFNTS 217
            ||||.||...:||. ......|..:.||.|...:.:.::: ..|:|||||||...:..| :.:.|
  Fly   367 RELALQIEMEVKKY-SFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMAN-VIDVS 429

  Fly   218 TMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGA 282
            |:..||||||||.|||||:..:..::.:..|.|||::.|||....|:.||:..:|:|:.|..|  
  Fly   430 TITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVG-- 492

  Fly   283 TPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKN-HLKQKIIVFVASCKQAK 346
                    |.......:|..:.:|::...      ||...:.||:|| ....|||:|.....:|.
  Fly   493 --------SLDLAATHSVKQIIKLMEDDM------DKFNTITSFVKNMSSTDKIIIFCGRKVRAD 543

  Fly   347 YLYEIFCKLRPGSPLLALYGTLHQ---------DRRIAIYEDFLRKSHVV--MFSTDVASRGLDF 400
            .|          |..|.|.|.:.|         ||..||.:   .||.||  :.:|||||||||.
  Fly   544 DL----------SSELTLDGFMTQCIHGNRDQMDREQAIAD---IKSGVVRILVATDVASRGLDI 595

  Fly   401 PAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDP 465
            ..:..|:..|.|.::.:|:||.||:.|...:|..:...|  .|::.::  ||.:.|.....|..|
  Fly   596 EDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFT--REDWAMA--KELIEILQEAEQEVP 656

  Fly   466 KKLFSPRVKIEA 477
            .:|.:...:.:|
  Fly   657 DELHNMARRFKA 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 146/524 (28%)
DEADc 74..277 CDD:238167 75/205 (37%)
HELICc 311..437 CDD:238034 44/137 (32%)
DUF4217 474..530 CDD:290667 1/4 (25%)
CG7878NP_649767.1 KH-I 92..150 CDD:238053
DEADc 288..489 CDD:238167 75/205 (37%)
DEXDc 298..505 CDD:214692 76/218 (35%)
Helicase_C 514..624 CDD:278689 43/122 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451427
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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