DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and CG5589

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_649009.1 Gene:CG5589 / 39979 FlyBaseID:FBgn0036754 Length:594 Species:Drosophila melanogaster


Alignment Length:566 Identity:151/566 - (26%)
Similarity:244/566 - (43%) Gaps:115/566 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GRKSGDNSQKRPRQEINKSRLAATEAEIQ-------DLKTKYA----------EIDA--TAIKKF 74
            |..|....:|:|::|   ..|:..|.|||       :.:.:|.          .:|:  |..:.|
  Fly    63 GDSSNQPKRKKPKKE---KTLSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDF 124

  Fly    75 AQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKW 139
            ...|   :.|:.|....|.|||.:|..::...||.:.::..|.||||||||||.|::..|..:| 
  Fly   125 KMLP---RLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLRAHK- 185

  Fly   140 SRTDGVGAIIISPTRELAYQIF----ETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQC----NI 196
              |.|:.|::::||||||.||:    |..::.|....|.:      |..:.::....:|    :|
  Fly   186 --TTGLRALVLAPTRELAQQIYRECAELTRETGLRTHFIS------KVSEAKQKHGAECKQRYDI 242

  Fly   197 LICTPGR---LLQHMDENPLFNTSTMEMLVLDEADRCLDMG---FQKTLNSI---IENFPPVRQT 252
            |:.||.|   |||  .|.||.:.|.:|..|||||||.::.|   |::.|:.|   ..|  |.:..
  Fly   243 LVSTPNRVRFLLQ--QEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSN--PTKCV 303

  Fly   253 LLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLE 317
            ..||||.|..|...|..:||:.|.:..|              ..|:|.    |.:||..:.:..|
  Fly   304 AFFSATYTVPVAKWALRHLKNLVRITIG--------------VQNSAT----ETVQQELLFVGSE 350

  Fly   318 -DKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFL 381
             .|:..:...::..|:..::|||.|.::||.|:|..  |..|..:..::....|.:|....:.|.
  Fly   351 GGKLVAIRDLVRQGLQPPVLVFVQSKERAKQLFEEL--LYDGINVDVIHAERSQHQRDNCVKAFR 413

  Fly   382 RKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSE---- 442
            ..|..|:..|::..||:||..||.|:..|.|.....||||.||:.|....|..:...|..:    
  Fly   414 EGSIWVLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQEDTSNL 478

  Fly   443 --------------EEYMISALK-EQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRA 492
                          .|||:...| .:....:|..:...::..|.:::        ||.:...:. 
  Fly   479 RGIALIIKNSGGTVPEYMLQMKKVRKSEAKMRAKKPLDREDISTKIR--------PETKGDEKH- 534

  Fly   493 FLSYIKSVFLMRNKRLFNV------FSLDLDAFAQSLGLAVTPRVP 532
                 ||..|.:.:|...:      :..||::..:.||...|...|
  Fly   535 -----KSTKLKKVERTEKILKNRKGYEKDLNSKQKKLGNIKTELKP 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 138/497 (28%)
DEADc 74..277 CDD:238167 77/219 (35%)
HELICc 311..437 CDD:238034 36/126 (29%)
DUF4217 474..530 CDD:290667 11/61 (18%)
CG5589NP_649009.1 SrmB 87..594 CDD:223587 143/539 (27%)
P-loop_NTPase 123..329 CDD:304359 77/221 (35%)
HELICc 349..469 CDD:238034 36/121 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451441
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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