DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and Dbp73D

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster


Alignment Length:722 Identity:159/722 - (22%)
Similarity:286/722 - (39%) Gaps:196/722 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QRQKPKGPGKPGSRFKPGSGTFKGAGGGRKSGDNSQKRPRQEIN------------------KSR 48
            |.::|:.|.:........|..|:..||    .|::.|:.:.::.                  :..
  Fly    71 QVEEPEKPLEVVQEEDVPSNEFQVLGG----DDSAAKKKKVQMQLPNWLAHPTIIEGGSLQPEEE 131

  Fly    49 LAATEAEIQ-DLKTKYA--EIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGK 110
            :.|:||..| |...||.  .:....||:.  ||:.|:          |.|..::..:..|..:.:
  Fly   132 VPASEAIDQLDYLEKYTCQALKQMKIKRL--FPVQKQ----------VIPWILEAHAKPPPFRPR 184

  Fly   111 DVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTD-GVGAIIISPTRELAYQIFETLKKVGKHHDFS 174
            |:..:|.|||||||||.||:::.|.    .|.| .|.|:::.|..|||.|::..:.::....:..
  Fly   185 DICVSAPTGSGKTLAFAIPIVQLLS----QRVDCKVRALVVLPVAELALQVYRVISELCSKTELE 245

  Fly   175 AGLIIGGKNLKFERTRM---------DQCNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRC 230
            ..|:.....|:.|:.::         .:.:|::.|||||:.|:.....|...:::.||:|||||.
  Fly   246 VCLLSKQHKLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRI 310

  Fly   231 LDMGFQKTLNSIIENFPPVRQT---------------------------LLFSATQTNTVQDLAR 268
            :|..||..|..:..:   |::|                           ||||||.:...:.|..
  Fly   311 MDAVFQNWLYHLDSH---VKETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQD 372

  Fly   269 LNLKDPVYVGYGGATPREEP--SASTKKTPNTAVLAVP-----------ELLQQSYVVLNLEDKI 320
            |.|..|...    ||....|  ..:|::..:|..|..|           ||.:| |.|..|..|.
  Fly   373 LRLFQPRLF----ATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQ-YCVTELRLKP 432

  Fly   321 TMLWSFIKNHLKQKIIVFVASCKQA-------KYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYE 378
            ..:::.::.:..::.:.|..|..||       |.|::.:     .:.:..|.|.|....|.....
  Fly   433 LTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKY-----STKVSELSGNLSAKVRNERLR 492

  Fly   379 DFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEE 443
            ||.......:..:|..:||:|...|:.|:..:.|..::.||||.||:||...:|..:.|||  |:
  Fly   493 DFAAGKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTARAGRKGTAVTVLT--EQ 555

  Fly   444 EYMI---------SALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKS 499
            :..:         ..|.|::::             ||.::|              |.| :.|.::
  Fly   556 DMTLFKKILSDANKGLGEEIHV-------------SPDIEI--------------QHA-VEYKEA 592

  Fly   500 VFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQGDNAKSINPLLSKL 564
            :..:|::::.|          ::..:|...||  ..|.|..:||        :...::.|    |
  Fly   593 LAGLRSEKVKN----------KNQKMAEKNRV--ATKALIHKKQ--------EETATVRP----L 633

  Fly   565 TKQQSFGGGDEDEENSDDEDFIKVKRKDHDVEGEPVKLDEEDDTENEAEAPLVVPKREKLVTKAS 629
            |..:                  |::.|.:::.....|..|..:::.:|:.....||.    ||..
  Fly   634 TLME------------------KLQIKANEIVQSSKKSSETKNSKTKADKTKYQPKE----TKKQ 676

  Fly   630 LAKKALK 636
            :..|.||
  Fly   677 IIAKQLK 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 129/555 (23%)
DEADc 74..277 CDD:238167 63/239 (26%)
HELICc 311..437 CDD:238034 32/132 (24%)
DUF4217 474..530 CDD:290667 7/55 (13%)
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 128/558 (23%)
DEAD 162..370 CDD:278688 58/224 (26%)
HELICc 418..551 CDD:238034 35/138 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451448
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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