DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and CG6418

DIOPT Version :10

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster


Alignment Length:182 Identity:37/182 - (20%)
Similarity:56/182 - (30%) Gaps:70/182 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RFPTFLKSLLLGVPVGVTLLDCVGYVARVEGVS----MQPALNP----------------DATVT 46
            |||..|....:||      ::.:|  ..|:|..    :.|..:|                |....
  Fly    69 RFPRILGHEAVGV------VESIG--ENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAE 125

  Fly    47 DYVFLSR---WAVRNMDVQRGDIIS--------------------LISPKDPTQKIIKRVVALQG 88
            |::..:|   .|.|..| ..|::|.                    .|||:.|..|     .||..
  Fly   126 DFISNTRRYGMASRFKD-SSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDK-----AALLS 184

  Fly    89 DVIST-LGYKLPYVTVPEGHCWVEGDHTGNSLDSNTFGPVSLGLVTARATQI 139
            ..:|| :|.......|.||....            .||..::||..|...::
  Fly   185 CGVSTGIGAAWKVANVEEGSTIA------------IFGLGAVGLAVAEGARL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 SrmB 71..493 CDD:440279 17/70 (24%)
DEADc_DDX10 83..279 CDD:350699 13/58 (22%)
DUF4217 474..530 CDD:464056
CG6418NP_648413.1 SrmB 269..634 CDD:440279
Blue background indicates that the domain is not in the aligned region.

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