Protein Alignment CG5800 and Gem3

DIOPT Version :9

• Sequence 1: NP_573230.1
• Gene: CG5800 / 32742
• FlyBaseID: FBgn0030855
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001261678.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Alignment Length: 996
• Identity: 220/996 - (22%)
• Similarity: 376/996 - (37%)
• Gaps: 296/996 - (29%)

  Fly    71 IKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLF 135
            :|.|.:..|.:.....|..:.||.||::|..:|..||...|::..:.:|:||||.::|.|::...
  Fly    24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSFN 88

  Fly   136 MNKWSRTDGVGAIIISPTRELAYQIFETLKKVGK-HHDFSAGLIIGGKNLKFERTRMDQCNILIC 199
            .|    .:...|:|:.||||||.|:.:|...:.| ..||.....|||.::..:|.||::..::|.
  Fly    89 PN----INQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNESRVIIG 149

  Fly   200 TPGRLLQHMDENPLFNTSTMEMLVLDEADRCLD-MGFQKTLNSIIENFPPVRQTLLFSATQTNTV 263
            |||||| |:.||.:|:.|.:.:|||||||:... ...|.|::.:||..|..||.:..|||....:
  Fly   150 TPGRLL-HLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQNL 213

  Fly   264 QDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLA----VPELLQQSYVVLNLEDKITMLW 324
            .:  ||            |...::|...:.....|.:|.    |.||.||:..|..:..|:.:|.
  Fly   214 DE--RL------------AKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILG 264

  Fly   325 SFIKNHLKQKIIVFVASCKQA----KYLYE--IFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRK 383
            ........::.|:|.:|..:|    .||..  |.|.|        :.|.:.|..|:.::|.:...
  Fly   265 QIFNQLPYEQAIIFASSQMRADSYKNYLTASGIDCHL--------ISGAMEQSERLHVFEGYRNF 321

  Fly   384 SHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMIS 448
            :..::.:||:.:||:|.|..|.|:.:|.|:|...|:||.||:.|..::|..:..:...:|.....
  Fly   322 TMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFR 386

  Fly   449 ALKEQLNIDIRCVQIDPKKL-------------FSPRVKIEAFLAQFP---ELRATAQRAFLSYI 497
            .:.:::......::...:.:             |...:|.|..|.:.|   :...:.:....|.:
  Fly   387 EMSKKIATAWSVLEFPKEPMPNEFNFWDFEKYNFDYYIKEENPLQEMPMPIKENRSKENVDASSV 451

  Fly   498 KSVFLMRN---KR---------LFNVFS---LDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQ 547
            ....|.::   ||         |.||.:   |:|:...:|.......||.  ||.:.||.:|::.
  Fly   452 DLENLQKDQDGKRRDPDKLPVALENVETQKELELENLPESSHNNKNLRVK--EKEIVRQGKLKET 514

  Fly   548 KEQGDNA---------KSINPLLSKLTKQ------------QSFGGGDEDEENSDDEDFIKVK-R 590
            ..:...:         ||..|  |||.||            ..:...::.:..:|.:::..|. .
  Fly   515 NSKAGGSKTNKTERRKKSNTP--SKLQKQITEVQQTPEITVNKYYMQEDIQRTADGKEYHPVNGA 577

  Fly   591 KDHDVEGE------------------PVKLDEE-------------------------------- 605
            .:|.|..:                  |::|.:|
  Fly   578 GNHQVPSKSNQKPVEFISPELTPTLTPLELTQEPSPTTVTPPAPPANSINNKTYCLAAPTQTSSM 642

  Fly   606 -----------DDTENEAEAPLVV---------------------------PKREKLVTKAS--- 629
                       ||..:.:...:||                           .:|.:|.:|..
  Fly   643 TIQNMVISNTVDDASSISSDSMVVCGYHSDRSYDTYYATSDEEEIWNRLMSKQRRQLKSKRGHGK 707

  Fly   630 ----LAKKALKKNLQVNSKLKFDDEGETMADDRSQMKALSARQRTV------------------- 671
                |.||...| |:.|.|.|..   :.|:......||...|:|.|
  Fly   708 RRVILYKKVFPK-LKANVKRKLK---KRMSSSCRSKKAHHLRKRHVYKNISLLPHMNLCHLLQKF 768

  Fly   672 ---------------NQDDDDGGINLVLSKALLTEEDQY------DKQRFRELVKKRHKLQREKL 715
                           ||..|:..:..:|.|...:..:.|      .|:.|:|.:|       |.|
  Fly   769 TNQERFLKRLHKYAKNQFIDNARVGFLLDKLYKSILEMYYNSAKERKKHFKEAMK-------ESL 826

  Fly   716 RK----KAEEAKGSDDEEEQQDD---------DNADD------------AGSESDHSVDLSW--- 752
            :.    :::|:..|::|||::.|         .|..|            :|||||......:
  Fly   827 KSIDNYESQESSESEEEEEEEKDLKNKLSVHVTNQMDIPPMPQAAVEIGSGSESDTEDSQEYGEG 891

  Fly   753 ----LPDPDKVYKNKPNAS----DRNESKSESSDASDDE-KADDSDGDDDD---VSDDEPAYKKS 805
                :.|.|......||:|    :..||.|...|.|..| ::..:.|::..   :||||
  Fly   892 EEIIVDDEDDGSDGGPNSSSGFVESQESVSSGIDTSVYETESTGASGNNSSAFFISDDE------ 950

  Fly   806 KLTNKMTLMDTEAIAASLLGS 826
                    .|||::..|..||
  Fly   951 --------SDTESLTDSEAGS 963

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5800	NP_573230.1	PRK01297	2..471	CDD:234938	116/424 (27%)
		DEADc	74..277	CDD:238167	70/204 (34%)
		HELICc	311..437	CDD:238034	34/131 (26%)
		DUF4217	474..530	CDD:290667	14/73 (19%)
Gem3	NP_001261678.1	SrmB	24..541	CDD:223587	143/547 (26%)
		P-loop_NTPase	27..228	CDD:304359	72/219 (33%)
		Helicase_C	259..367	CDD:278689	32/115 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451439
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930