DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and Ddx24

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_954550.1 Gene:Ddx24 / 373065 RGDID:727929 Length:851 Species:Rattus norvegicus


Alignment Length:783 Identity:174/783 - (22%)
Similarity:293/783 - (37%) Gaps:259/783 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGRKSGDNSQKRPRQEINKS---------------RLAAT-EAEIQDLKTKYAEIDATAIKKFAQ 76
            ||..|...:|..||::.||.               :.|.| ..|:||.|   |::.|     :..
  Rat   140 GGATSESLAQTVPRKKKNKGKKKLDTFQSTAPKVPKKAKTWMPEVQDQK---ADVSA-----WRD 196

  Fly    77 FPLSKKTQKALAESKFVHPTQVQRDSIGPALQGK-DVLGAAITGSGKTLAFLIPVLEHLFMNKWS 140
            ..:.|...:||:...|..||.:|..::.||::.| |:||||.|||||||||.||::..:.  :|.
  Rat   197 LFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVL--QWH 259

  Fly   141 R--------------------------TDG----------------------------VGA---- 147
            :                          .||                            .||    
  Rat   260 KMKAPPIPSSAGVPPRLGAAAHRGSPCKDGAKSGVLPEEATIETEAQPSDSGVQATAKAGASAAS 324

  Fly   148 ------------------------------------------------------------IIISP 152
                                                                        ::::|
  Rat   325 AQAGLFCDDDAGEGPSSLVEEKQSKDREEKLDEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTP 389

  Fly   153 TRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDE-NP-LF 214
            |||||.|:.:.:..|.|....:..:::||.:.:.::..::: ..|:|.|||||.:.:.| :| |.
  Rat   390 TRELAVQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKHPHLS 454

  Fly   215 NTSTMEMLVLDEADRCLDMGFQKTLNSIIE-----NFPPVRQTLLFSATQTNTVQDLARLNLKDP 274
            |...:..||:|||||.::......|:.::|     .:.|.||||:||||.|...|..||:..|..
  Rat   455 NLRQLRCLVIDEADRMVEKDHFAELSQLLEMLNDSQYNPNRQTLVFSATLTLVHQAPARILHKKH 519

  Fly   275 VYVGYGGATPREEPSASTKKTPNTAVL----------------------AVPELLQQSYVVLNLE 317
            |                 ||...||.|                      ...|.|.::.:....:
  Rat   520 V-----------------KKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEGTVETLTETKIHCETD 567

  Fly   318 DKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLR 382
            :|...|:.|:..: ..:.:||..|....|.|..:. |:....| |.|:..:||.:|:...|.|.|
  Rat   568 EKDLYLYYFLMQY-PGRSLVFANSISCIKRLSGLL-KVLDIMP-LTLHACMHQKQRLRNLEQFAR 629

  Fly   383 KSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEE---E 444
            ....|:.:||||:||||.|.|..|:....|.....||||:||:||..:.|..|:::.|.:.   :
  Rat   630 LEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARATSEGLSLMLIGPEDVINFK 694

  Fly   445 YMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFL--AQFPELRATAQRAFLSYIKSVFLMRNKR 507
            .:...||:..:|.:..||.....:...|:::...:  |::...:|....:::....:        
  Rat   695 KIYKTLKKDEDIPLFPVQSKYMDMVKERIRLARQIEKAEYRNFQACLHNSWIEQAAA-------- 751

  Fly   508 LFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKE--QGDNAKSINPLLSKLTKQQSF 570
                 :|:::                ||:.:::..:..||:|  :....|.:...|..|..|..|
  Rat   752 -----ALEIE----------------LEEEMYKGGKADQQEERRRQKQMKILKQELRHLLSQPLF 795

  Fly   571 GGGDEDEENSDDEDFIKVKRKDHDVEGEPVKLDEEDDTENEAEAPLVVPKR-EKLVTKASLAKKA 634
                  :||        :|.:.....|.|.:             |:|.|:. |..::..|..|:.
  Rat   796 ------QEN--------LKTRYPTQSGRPPQ-------------PVVAPRNVESALSCLSRQKRR 833

  Fly   635 LKK 637
            .||
  Rat   834 RKK 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 147/610 (24%)
DEADc 74..277 CDD:238167 77/329 (23%)
HELICc 311..437 CDD:238034 41/125 (33%)
DUF4217 474..530 CDD:290667 3/57 (5%)
Ddx24NP_954550.1 SrmB 191..735 CDD:223587 134/570 (24%)
P-loop_NTPase 194..505 CDD:304359 71/312 (23%)
Helicase_C 567..675 CDD:278689 38/110 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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