DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and CG9143

DIOPT Version :10

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0287774 Length:813 Species:Drosophila melanogaster


Alignment Length:692 Identity:176/692 - (25%)
Similarity:263/692 - (38%) Gaps:212/692 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KSGDNSQK-------------RP-----RQEINKSRLAATEAEIQD--------LKTKYAEIDAT 69
            |..|||::             ||     .:|:.|:..:|.:.|..|        :.|..|| |.:
  Fly   152 KENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQESTDEEAPELVPISTGEAE-DMS 215

  Fly    70 AIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQG-KDVLGAAITGSGKTLAFLIPVL-- 131
            |..... .|.|  ..:||.|..|..|||:|..::..|:.| ||:||||.|||||||||.||:|  
  Fly   216 AWNGLG-VPAS--ILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAG 277

  Fly   132 -----------------------------EHLFMNKWSRTDGV-GA------------------- 147
                                         ||.........|.| ||                   
  Fly   278 IMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTPLY 342

  Fly   148 -IIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQC-NILICTPGRL--LQHM 208
             ::::||||||.|:...|....|:.......|.||..:..:...:.|| :|::.|||||  |...
  Fly   343 GLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQ 407

  Fly   209 DENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSII------ENFPPVRQTLLFSATQTNTVQDL- 266
            ....|.....:..||:||.||.::.|..:.|.|::      |.....||..::|||.| .|.|| 
  Fly   408 GNRHLGKIEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLT-LVHDLP 471

  Fly   267 ---ARLNL-KDPVYV-------------GYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVL 314
               .:.|: |.|.:|             ..|.:.|:.....|:::|..|        |.:|.::.
  Fly   472 DHMQKRNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSSQQTAQT--------LTESRLLC 528

  Fly   315 NLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYED 379
            .::.|...|:.||:.| ..:.|||..|....|.|..:| .|...:| |.|:..:.|.:|:...|.
  Fly   529 PIDHKDYHLYYFIQRH-PGRTIVFCNSIDCVKRLATLF-GLLDCNP-LPLHANMIQKQRLKNLER 590

  Fly   380 FLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEE 444
            |......::.:||||:||||.|.|..|:....|.....|:||:||:||....|..::.:.|.|  
  Fly   591 FRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHGITVMFMEPGE-- 653

  Fly   445 YMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLF 509
                                        ||                    ||:|         |:
  Fly   654 ----------------------------VK--------------------SYVK---------LY 661

  Fly   510 NVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQGDNAKSINPLLSKLTKQQSFGG-- 572
            .......|          .|..|.||:|      :...:|:.:.|:.::....||.:.||..|  
  Fly   662 KTLERTED----------LPLFPILERF------MGAVRERVNLARDLDKEELKLKRVQSERGWM 710

  Fly   573 ------------GDEDEENSD-DEDFIKVKRKDHDVEGEPVK 601
                        |..||..|| |||...::|:.:.:..|.|:
  Fly   711 KKHAEEMDMIIDGYNDESGSDQDEDPFVIERRRNRLRVETVR 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 SrmB 71..493 CDD:440279 132/501 (26%)
DEADc_DDX10 83..279 CDD:350699 79/275 (29%)
DUF4217 474..530 CDD:464056 6/55 (11%)
CG9143NP_611467.1 DEADc_DDX24 226..510 CDD:350704 81/284 (29%)
SF2_C_DEAD 521..648 CDD:350174 42/129 (33%)

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