DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and CG10333

DIOPT Version :10

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster


Alignment Length:427 Identity:131/427 - (30%)
Similarity:192/427 - (44%) Gaps:72/427 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHL-FMNKWSRTDGVG----AIIIS 151
            :..||.:||.:|...||.:|::|.|.||||||||||||:|..: .:.|..|.:.|.    |||::
  Fly   414 YKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMA 478

  Fly   152 PTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFE--RTRMDQCNILICTPGRLLQHMDENPLF 214
            ||||||.||.|...|.|:.......:::||.:.:.:  |.|:. |.|:|.|||||:..: ||...
  Fly   479 PTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLG-CEIVIATPGRLIDVL-ENRYL 541

  Fly   215 NTSTMEMLVLDEADRCLDMGFQKTLNSIIENFP-------------------------PVRQTLL 254
            ..:....:|||||||.:||||:..:..|:|..|                         ..|||::
  Fly   542 VLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVM 606

  Fly   255 FSATQTNTVQDLARLNLKDP--VYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLE 317
            |:||....|:.|||..|:.|  ||:|..|           |.|..|         :|...::...
  Fly   607 FTATMPPAVERLARTYLRRPATVYIGSVG-----------KPTERT---------EQIVYMMGEN 651

  Fly   318 DKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLR 382
            ||...|...:...:...:|:||...|.|..|.:...||  |.....|:|...|::|.........
  Fly   652 DKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKL--GYNSCTLHGGKGQEQREYALAALKS 714

  Fly   383 KSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
            .:..::.:||||.||:|...|:.|:..|..:.:..|.||.||:.|....| |.:.....::..:.
  Fly   715 GAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTG-CAISFVTKDDSALF 778

  Fly   448 SALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPE 484
            ..||:       ||...|.....|.      |...||
  Fly   779 YDLKQ-------CVSASPVSTCPPE------LMNHPE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 SrmB 71..493 CDD:440279 131/427 (31%)
DEADc_DDX10 83..279 CDD:350699 82/220 (37%)
DUF4217 474..530 CDD:464056 3/11 (27%)
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164
SrmB 395..783 CDD:440279 123/393 (31%)
Blue background indicates that the domain is not in the aligned region.

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