DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and ddx31

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_021327284.1 Gene:ddx31 / 325248 ZFINID:ZDB-GENE-030131-3973 Length:739 Species:Danio rerio


Alignment Length:692 Identity:203/692 - (29%)
Similarity:317/692 - (45%) Gaps:131/692 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QKPKGPGKPGSRFKPGSGTFKGAGGGRKSGDNSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDA 68
            |:.....|..|:.|    ||.     :|:....:...|..|..|.|.....||.|:.:.      
Zfish    92 QRENSEAKSPSKVK----TFP-----KKAPTEHEDHGRPFIKTSSLFRNNPEIPDVLSP------ 141

  Fly    69 TAIKKFAQFPLSKKTQKALAESKF----VHP---------------TQVQRDSIGPALQGKDVLG 114
                     .:::..:|....:.|    :||               |.||:.:|...:.|||.:.
Zfish   142 ---------AVNQVKEKVFTSNTFEELNLHPHLVATLHKVLNVSSMTSVQKQTIPVLMSGKDAVV 197

  Fly   115 AAITGSGKTLAFLIPVLEHL--FMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSA-G 176
            .:.||||||||:.||:::.|  ...|..|:||..|::|.||||||.|.|:..:|:.:...:.. |
Zfish   198 RSQTGSGKTLAYGIPMVQFLQAIQPKVKRSDGPLAVVIVPTRELALQSFQMFQKLLRPFTWIVPG 262

  Fly   177 LIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLN 240
            :::||:..|.|:.|:.: .|:||.|||||:.|:........|.:..|:||||||.||:||:|.|.
Zfish   263 VLMGGEKKKAEKARLRKGINVLISTPGRLVDHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLT 327

  Fly   241 SI---IENFPPVRQTLLFSATQTNTVQDLARLNLKDP--VYVGYGG-----ATPREEPSASTKKT 295
            .|   :....|.||.:|.|||.|..:..||.:::|||  |:|..|.     |.|:..|.|.:.. 
Zfish   328 VILNALNTAGPYRQNVLLSATITEGLSRLASISMKDPVSVHVSEGSEETVEACPQAAPQALSDS- 391

  Fly   296 PNTAVLAVPELLQQSYVVLNLEDKITMLWSFI----KNHLKQKIIVFVASCKQAKYLYEIF---- 352
                 .||||.|||..||:..:..:..|.:||    |...:||:::|::||:..::|..:|    
Zfish   392 -----YAVPERLQQHVVVVPSKLHLVCLAAFILAKCKFEQRQKLVIFISSCEAVEFLLNLFTAVL 451

  Fly   353 CKLRPGSP--------LLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQL 409
            |::...:.        ...|:|.:.|:.|..::::|.:....::..||||:||||.|.|.|:||.
Zfish   452 CEIPSNTSSKSTSCLNFYRLHGNMRQEERTEVFQEFSQCKTGILLCTDVAARGLDLPQVTWIVQY 516

  Fly   410 DCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYM-------ISALKEQLNIDIRCVQI---- 463
            :.|...::|:||.||:||...:|..||.|||||..::       || |.|...:||....:    
Zfish   517 NPPVSAAEYVHRVGRTARIGAQGSSLLFLTPSETAFVDVLANHNIS-LSEMKMVDILSTLMKDER 580

  Fly   464 -------DPKK---LFSPRVKIEAFLAQFP---------ELRATAQ-------RAFLSYIKSVFL 502
                   |.|:   .|...|:..|.|.|..         |...||:       ||:.:|..|:  
Zfish   581 FKGRGKWDSKRSADAFEQEVRERATLLQTDFENYVHASNESLQTAKSALQCFLRAYTTYPSSL-- 643

  Fly   503 MRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQGDNAKSINPLLSKLTKQ 567
               |.:|::..|.|...|:|.||...|: .............:..|:..|.||| .|  .|||.:
Zfish   644 ---KHIFHIRMLHLGHAAKSFGLRDAPQ-GLASSISTNPANSKHSKKAKDKAKS-PP--KKLTAK 701

  Fly   568 QSFGGGDEDEENSDDEDFIKVKRKDHDVEGEPVKLDEEDDTE 609
            |........|.:|..:...|.|:|..:.:|:     .|:.|:
Zfish   702 QRVSNLMRSEYDSGMDGQSKAKKKRKNKKGQ-----AEESTD 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 165/536 (31%)
DEADc 74..277 CDD:238167 81/230 (35%)
HELICc 311..437 CDD:238034 42/141 (30%)
DUF4217 474..530 CDD:290667 18/71 (25%)
ddx31XP_021327284.1 SrmB 124..613 CDD:223587 160/510 (31%)
DUF4217 607..668 CDD:316476 16/65 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.