DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and CG6227

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster


Alignment Length:686 Identity:179/686 - (26%)
Similarity:288/686 - (41%) Gaps:145/686 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TEAEIQDLKTKYAEIDATA------IKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGK 110
            |.|:::..::....|....      ||.:||..:|||..:.|....|..||.:|..:|...:.|:
  Fly   484 TAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGR 548

  Fly   111 DVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVG--AIIISPTRELAYQIFETLKKVGKHHDF 173
            |::|.|.|||||||||::|:..|: :::.|..||.|  |||::|||||..||.:.::|..|    
  Fly   549 DLIGIAKTGSGKTLAFILPMFRHI-LDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSK---- 608

  Fly   174 SAGL----IIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDENP--LFNTSTMEMLVLDEADRCL 231
            |.||    :.||..:..:...:.: ..|::|||||::..:..|.  :.|...:..:|||||||..
  Fly   609 SLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMF 673

  Fly   232 DMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTP 296
            ||||:..:..||:|..|.|||::||||....::.|||..||.|:.|..||.:             
  Fly   674 DMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRS------------- 725

  Fly   297 NTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQ-KIIVFVASCKQAKYLYEIFCKLRPGSP 360
                 .|.:.::|..|:||.:.|...|...:..:.:. .|||||...:.|..|....  ::...|
  Fly   726 -----VVCKEVEQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDL--MKASYP 783

  Fly   361 LLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRS 425
            .::|:|.:.|..|.:...||......::.:|.||:||||...:..||..|.|.....|:||.||:
  Fly   784 CMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRT 848

  Fly   426 ARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQ 490
            .|...:|.....:||.:..|....::          .:|......| .:::|...::..|:....
  Fly   849 GRAGKKGSAYTFITPEQSRYAGDIIR----------AMDLSGTLIP-AELQALWTEYKALQEAEG 902

  Fly   491 RAFLSYIKSVF---------LMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQ 546
                   |:|.         ...:::.||...........:||||.:.....:|      :.:.|
  Fly   903 -------KTVHTGGGFSGKGFKFDEQEFNAAKESKKLQKAALGLADSDDEEDIE------QDIDQ 954

  Fly   547 QKEQGDNAK----------------------------SINPLLSKLTKQQ--------------- 568
            |.||...||                            ..||.|:....|.               
  Fly   955 QIEQIFAAKRTVKDTSAAATAAAAAAAAAAAAAAAVSGANPALASAAAQAAAAAAAANIAIAAAS 1019

  Fly   569 -----------SFGGGDEDEENSDDEDFIK------VKRKDHDVEGEPVKLDEEDDTENEAEAPL 616
                       :.||.    .:||..:..|      ...|:.|.:|..|.:      |...:.|.
  Fly  1020 APAAAGGAPSVAMGGA----LSSDKLELAKRLASKINSSKNLDTKGSVVTV------EPMIKGPH 1074

  Fly   617 VVPKREKLVTKASLAKK-ALKKNLQVNSKLKFDDEG 651
            |......|:|..::|:: |.|.|.::|.:.|.|:||
  Fly  1075 VTGAAATLLTARTVAEQMAAKLNNKLNYQPKEDEEG 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 134/434 (31%)
DEADc 74..277 CDD:238167 83/211 (39%)
HELICc 311..437 CDD:238034 37/126 (29%)
DUF4217 474..530 CDD:290667 10/64 (16%)
CG6227NP_573020.2 SrmB 482..967 CDD:223587 152/531 (29%)
DEADc 516..719 CDD:238167 81/207 (39%)
HELICc 733..860 CDD:238034 38/128 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451426
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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