DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and ddx18

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001003411.1 Gene:ddx18 / 321127 ZFINID:ZDB-GENE-030131-9685 Length:653 Species:Danio rerio


Alignment Length:609 Identity:207/609 - (33%)
Similarity:316/609 - (51%) Gaps:71/609 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QKPKGPGKPGSRFKPGSGTFKGAGGGRKSGDNSQKRPRQEINKSRLAATEAEIQD---------- 58
            ||||...|.......|..|....          :|..:|.::.::.:|.|.|.|:          
Zfish    72 QKPKKKKKKRKLDATGESTTSSV----------KKAKKQSVDTTQASAGEEEQQEEGNLETVKCP 126

  Fly    59 -----LKTKYAEID--------------ATAIKKFAQFP--LSKKTQKALAESKFVHPTQVQRDS 102
                 .|...||.|              |...:.||...  :|:.|.|.:.|..|...|::|..:
Zfish   127 ENGNNEKEGSAEEDSDEDGPQLPSGLTGAFEDRSFASLSEVVSENTLKGVKEMGFDTMTEIQHKT 191

  Fly   103 IGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKV 167
            |.|.|:|:|||.||.||||||||||||.:|.::..|:...:|.|.|::|||||||.|.:..||::
Zfish   192 IRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTGVIVLSPTRELAMQTYGVLKEL 256

  Fly   168 GKHHDFSAGLIIGGKNLKFERTRM-DQCNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCL 231
            ..||..:.|||:||.|...|..:: :..|||:.||||||.|:...|.|....::.|::|||||.|
Zfish   257 MTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRIL 321

  Fly   232 DMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNL-KDPVYVGYGGATPREEPSASTKKT 295
            ::||::.|..||:..|..||::|||||||..|:||||::| |:|:|||..          ..|.|
Zfish   322 EVGFEEELKQIIKLLPKKRQSMLFSATQTRKVEDLARISLKKEPLYVGVD----------DNKDT 376

  Fly   296 PNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSP 360
                  |..|.|:|.|||...|.:..:|::|:|.:.|:|::||.:||...|:.||:...:  ..|
Zfish   377 ------ATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYI--DLP 433

  Fly   361 LLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRS 425
            ::|::|...|.:|...:..|......::..||||:||||.|.|:|:||.|.|:|..:||||.||:
Zfish   434 VMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRT 498

  Fly   426 ARN-KTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATA 489
            ||. ..||..||:|.|.|..::  ...:|..:.:...:....|:...:.:::..:.:...|..:|
Zfish   499 ARGINGRGHALLILRPEELGFL--RFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSA 561

  Fly   490 QRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQGDNA 554
            |.|:.||:::......|:::||.:|||...|.|.|..|.   ||::..:...|.::..|..|...
Zfish   562 QEAYKSYVRAYDSHSLKQIYNVETLDLPKVAMSFGFKVP---PFVDLNVHSSKGVKLHKRGGGGG 623

  Fly   555 ----KSINPLLSKLTKQQSFGGGD 574
                ||.|...:|:.|..:.|.||
Zfish   624 FGYQKSKNVHKAKIFKHVNKGKGD 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 178/500 (36%)
DEADc 74..277 CDD:238167 96/206 (47%)
HELICc 311..437 CDD:238034 49/126 (39%)
DUF4217 474..530 CDD:290667 16/55 (29%)
ddx18NP_001003411.1 SrmB 160..646 CDD:223587 187/508 (37%)
DEADc 161..368 CDD:238167 96/206 (47%)
HELICc 382..511 CDD:238034 51/130 (39%)
DUF4217 543..601 CDD:290667 16/60 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D218522at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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