DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and Ddx31

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001101294.2 Gene:Ddx31 / 311835 RGDID:1304895 Length:682 Species:Rattus norvegicus


Alignment Length:696 Identity:198/696 - (28%)
Similarity:303/696 - (43%) Gaps:169/696 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHP---- 95
            |.::..:..:..|.|.....||       .|:..|.:|:..:...|.:..:.|.    :||    
  Rat    63 NERQEEKPCVKTSSLFKNNPEI-------PELHRTVVKQAREQVFSPEAFQELD----LHPHLIS 116

  Fly    96 -----------TQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHL--FMNKWSRTDGVGA 147
                       |.||:.||...|:|:|.|..:.||||||||:.|||::.|  ..:|..|:||..|
  Rat   117 TINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYA 181

  Fly   148 IIISPTRELAYQIFETLKKVGKHHDFSA-GLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDE 210
            :::.||||||.|.|:|::|:.|...:.. |:::||:..|.|:.|:.: .||||.|||||:.|:..
  Rat   182 LVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKS 246

  Fly   211 NPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFP---PVRQTLLFSATQTNTVQDLARLNLK 272
            ....:.:.:..||:|||||.||:||:|.:..|:....   ..||.:|.|||.|..|..||.::|.
  Rat   247 TKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVLLSATLTEGVTRLADISLH 311

  Fly   273 DPVYV-----GYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLK 332
            :||.:     .:....|:|..|.....      .|:||.|.|..|::..:.::..|.:||....|
  Rat   312 NPVSISVLDKSWDQPNPKEVASIQLDS------FAIPESLDQYVVLVPSKLRLVCLAAFILKKCK 370

  Fly   333 ----QKIIVFVASCKQAKYLYEIF-----CKLRPGSP-------------LLALYGTLHQDRRIA 375
                ||:|||.:||:..::.|.:|     |  ..|:|             .|.|:|.:.|:.|.:
  Rat   371 FEKDQKMIVFFSSCELVEFHYNLFLHTLLC--HSGTPASETLPSASWPLKFLRLHGNMKQEERTS 433

  Fly   376 IYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTP 440
            ::.:|......|:..|||||||||.|.|.|:||...|...::||||.||:||....|..||:|.|
  Rat   434 VFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEYIHRIGRTARIGCHGSSLLILAP 498

  Fly   441 SEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLA-----------------------QF 482
            ||.||:.|....::|:.              .:|:|..||                       |.
  Rat   499 SEAEYVNSLASHKINVS--------------EIKLEGILAVLAKDDCFKRRQRGAQRSHATGPQE 549

  Fly   483 PELRAT-------------------AQRAFLSYIK--SVFLMRNKRLFNVFSLDLDAFAQSLGLA 526
            ...|||                   |::|..|:|:  :.:....|.:|:|.||.|...|:|.||.
  Rat   550 IRERATVLQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRSLHLGHVAKSFGLR 614

  Fly   527 VTPRVPFLEKFLWRQKQLQQQKEQGDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKVKRK 591
            ..||                  ..|.:|          .::.||...|...         |.:||
  Rat   615 DAPR------------------NLGVSA----------VRKASFKRPDPRR---------KTQRK 642

  Fly   592 DHDVEGEPVKLDEEDDTENEAEAPLVVPKREKLVTKASLAKKALKK 637
            .|.|..|.:..:.....|...      ||..|...:.:.:|..|::
  Rat   643 HHLVPAEVLHSEHSSGLEGNG------PKGRKQGLRVAPSKPGLRR 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 157/484 (32%)
DEADc 74..277 CDD:238167 83/224 (37%)
HELICc 311..437 CDD:238034 49/147 (33%)
DUF4217 474..530 CDD:290667 22/99 (22%)
Ddx31NP_001101294.2 SrmB 101..635 CDD:223587 177/587 (30%)
DEADc 105..317 CDD:238167 82/215 (38%)
HELICc 347..495 CDD:238034 50/149 (34%)
DUF4217 557..618 CDD:290667 14/60 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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