DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and Ddx51

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:XP_006249623.2 Gene:Ddx51 / 304570 RGDID:1309580 Length:635 Species:Rattus norvegicus


Alignment Length:555 Identity:138/555 - (24%)
Similarity:225/555 - (40%) Gaps:118/555 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QKPKGPGKPGSRFKPGSGTFKGAGGGRKSGDNSQKR-PRQE------------INKSRLAATE-- 53
            :..:.||:     .|.....:....||..||.::|: |:.:            :.||   .||  
  Rat   108 ESAEDPGE-----SPQEDVQRPPAPGRVLGDFARKKVPKVQPFLPAWLAKPSCVKKS---VTEDL 164

  Fly    54 AEIQDLKTKYAEID----ATAIKKFAQFPLSKKTQKALAESK---FVHPTQVQRDSIGPALQGKD 111
            ..|:|:...:.::.    |..|..:  ||:......||.||.   |:    |.|....|:    |
  Rat   165 TPIEDIPEVHPDLQKQLRANGISSY--FPVQAAVIPALLESADNGFL----VGRGGYQPS----D 219

  Fly   112 VLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAG 176
            :..:|.|||||||||:|||::.|.......   :.|:::.||:|||.|:.:..............
  Rat   220 LCVSAPTGSGKTLAFVIPVVQALLHRVVCH---IRALVVLPTKELAQQVSKVFNIYTDTTPLRVA 281

  Fly   177 LIIGGKNLKFERTRMDQ---------CNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLD 232
            |:.|.|:|..|:..:.|         .:|::.|||||:.|:|:.|.|:...:..|::|||||.:|
  Rat   282 LVTGQKSLAKEQESLVQKTADGFCCLADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMID 346

  Fly   233 MGFQKTL-------------------------------NSIIENFPPVRQTLLFSATQTNTVQDL 266
            ...|..|                               ::.|...|  .|.||||||.|...:.|
  Rat   347 SMHQSWLPRVVAAAFYTEDPTGSCALLQRTQPQAVTAASTCIPQMP--LQKLLFSATLTQNPEKL 409

  Fly   267 ARLNLKDP--VYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKN 329
            .||.|..|  .....|..:||:    :.:...|......|..|...||...|..|..:::..:..
  Rat   410 QRLGLYQPRLFSTRLGHQSPRD----TVEVDENLGKYTFPVGLTHHYVPCRLSSKPLIVFHLVLG 470

  Fly   330 HLKQKIIVFVASCKQAKYLY------------EIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLR 382
            ....:.:.|..|.:.:..|:            |...:..||             :|..|.:.|.:
  Rat   471 MNFSRALCFTNSRENSHRLFLLAQAFGGVSVAEFSSRYGPG-------------QRKKILKQFEQ 522

  Fly   383 KSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMI 447
            ....::.|||..:||:|...|..|:..|.|:.:..|:||.||:||....|:...:|...:|...:
  Rat   523 GKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFL 587

  Fly   448 SALKEQLNIDIRCVQIDPKKLFSPRV-KIEAFLAQ 481
            ..:.|....::.|.:: |:||..|.| :.|..|:|
  Rat   588 QMVSEAGVPELACHEV-PRKLLQPLV
ARYETALSQ 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 133/542 (25%)
DEADc 74..277 CDD:238167 72/247 (29%)
HELICc 311..437 CDD:238034 31/137 (23%)
DUF4217 474..530 CDD:290667 3/8 (38%)
Ddx51XP_006249623.2 PRK01297 77..612 CDD:234938 134/544 (25%)
DEADc_DDX51 177..421 CDD:350714 74/258 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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