Protein Alignment CG5800 and Ddx49

DIOPT Version :10

• Sequence 1: NP_573230.1
• Gene: CG5800 / 32742
• FlyBaseID: FBgn0030855
• Length: 826
• Species: Drosophila melanogaster
• Sequence 2: NP_001108495.2
• Gene: Ddx49 / 290660
• RGDID: 1311124
• Length: 480
• Species: Rattus norvegicus
• Alignment Length: 532
• Identity: 148/532 - (27%)
• Similarity: 237/532 - (44%)
• Gaps: 108/532 - (20%)

  Fly    74 FAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNK 138
            ||:..||....:...:.....||.||...|...|:|:|.||.|.||||||.||::|:|:.|..:.
  Rat     4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDP 68

  Fly   139 WSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMD-QCNILICTPG 202
            :    |:..::::|||||||||.|..:.:||.......:|:||.::..:...:. :.:::|.|||
  Rat    69 Y----GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPG 129

  Fly   203 RLLQHMDENPLFNTSTMEMLVLDEADRCLDMG---FQKTLNSIIENFPPVRQTLLFSATQTNTVQ 264
            ||..|:..:..||...:..||||||||.|:.|   |...|.:|:...|..|||||||||.|:|::
  Rat   130 RLADHLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVPARRQTLLFSATLTDTLK 194

  Fly   265 DLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKN 329
            :|..|....|.:.       ..:.:..|.:..:...|.|||.::.:|:|
  Rat   195 ELQGLATNQPFFW-------EAQATVRTVEQLDQRYLLVPEKVKDAYLV---------------- 236

  Fly   330 HLKQ---------KIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSH 385
            ||.|         .||:|..:||..:.|..:..|.  ..|.:||:..:.|..|.|....|...::
  Rat   237 HLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKF--NFPTVALHSMMKQKERFAALARFKSSTY 299

  Fly   386 VVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISAL 450
            .::.:|||||||||.|.|..|:..:.|.....||||.||:||...:|:.:.::| ..:.:::.|:
  Rat   300 RILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT-QYDIHLLHAI 363

  Fly   451 KEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLD 515
            :|::.                        .|..|| |..:...|..:..|.::|
  Rat   364 EEEIK------------------------QQLAEL-AVEEAQVLQILTQVNVVR----------- 392

  Fly   516 LDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQGDNAKSINPLLSKLTKQQSFGGGDEDEENS 580
                                    |:.:::.:....|..|.||.     .||....|.|.|.|..
  Rat   393 ------------------------RECEIKLEASHFDEKKEINK-----RKQMILEGKDPDLEAK 428

  Fly   581 DDEDFIKVKRKD 592
            ...:..|:|:::
  Rat   429 RKAELAKIKQQN 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5800	NP_573230.1	SrmB	71..493	CDD:440279	132/431 (31%)
		DEADc_DDX10	83..279	CDD:350699	75/199 (38%)
		DUF4217	474..530	CDD:464056	7/55 (13%)
Ddx49	NP_001108495.2	SrmB	1..380	CDD:440279	132/430 (31%)
		Spc7	<359..>460	CDD:197874	22/147 (15%)