DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and Ddx24

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_001152974.1 Gene:Ddx24 / 27225 MGIID:1351337 Length:903 Species:Mus musculus


Alignment Length:775 Identity:182/775 - (23%)
Similarity:294/775 - (37%) Gaps:237/775 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GGRKSGDNSQKRPRQEINKSR-----LAATEAEI--QDLKTKYAEI-DATA-IKKFAQFPLSKKT 83
            ||.||...:|..||::.||.:     ..:|..::  :..||..||: |..| :..:....:.|..
Mouse   186 GGAKSESLAQAAPRKKKNKGKKKLDTFQSTSPKLPKKSKKTWMAEVHDQKADVSAWRDLFVPKAV 250

  Fly    84 QKALAESKFVHPTQVQRDSIGPALQGK-DVLGAAITGSGKTLAFLIPVLEHLFMNKW-------- 139
            .:||:...|..||.:|..::.||::.| |:||||.|||||||||.||::..:.  :|        
Mouse   251 LRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVL--QWHKMKAPPI 313

  Fly   140 ------------------------SRTD-------------------GVGA-------------- 147
                                    .||:                   ||.|              
Mouse   314 PRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQPSDSGVQATPETSASASAQTLL 378

  Fly   148 ----------------------------------------------------------IIISPTR 154
                                                                      ::::|||
Mouse   379 VCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTR 443

  Fly   155 ELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDE-NP-LFNT 216
            |||.|:.:.:..|.|....:..:::||.:.:.::..::: ..|:|.|||||.:.:.| :| |.|.
Mouse   444 ELAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNL 508

  Fly   217 STMEMLVLDEADRCLDMGFQKTLNSIIE-----NFPPVRQTLLFSATQTNTVQDLARLNLKDPV- 275
            ..:..||:|||||.::.|....|:.::|     .:.|.||||:||||.|...|..||:..|..| 
Mouse   509 RQLRCLVIDEADRMVEKGHFAELSQLLEMLNDSQYNPSRQTLVFSATLTLVHQAPARILHKKHVK 573

  Fly   276 -------------YVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFI 327
                         .||..|     :|.. ...|.|...:   |.|.::.:....::|...|:.|:
Mouse   574 KMDKTDKLDLLMQKVGMRG-----KPKV-IDLTRNEGTV---ETLTETKIHCETDEKDLYLYYFL 629

  Fly   328 KNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTD 392
            ..: ..:.:||..|....|.|..:. |:....| |.|:..:||.:|:...|.|.|....|:.:||
Mouse   630 MQY-PGRSLVFANSISCIKRLSGLL-KVLDVMP-LTLHACMHQKQRLRNLEQFARLQDCVLLATD 691

  Fly   393 VASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNID 457
            ||:||||.|.|..|:....|.....||||:||:||..:.|..|:::.|.:               
Mouse   692 VAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEGLSLMLIGPED--------------- 741

  Fly   458 IRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQS 522
                .|:.||::....|.|    ..|                        ||.|.|..:|...:.
Mouse   742 ----VINFKKIYKTLQKDE----DIP------------------------LFPVQSKYMDVVKER 774

  Fly   523 LGLAVTPRVPFLEKFLWRQKQL---QQQKEQGDNAKSINPLLSKLTKQQSFGGG--DEDEENSDD 582
            :.||..     :||..:|..|.   ....||...|..|.      .:::.:.||  |:.||....
Mouse   775 IRLARQ-----IEKAEYRNFQACLHNSWIEQAAAALEIE------LEEEMYKGGKADQQEERRRQ 828

  Fly   583 EDFIKVKRKDHDVEGEPV---KLDEEDDTENEAEAPLVVPKR--EKLVTKASLAKKALKK 637
            :....:|::...:..:|:   .|.....|::......|:..|  |..::..|..|:..||
Mouse   829 KQMKMLKQELRHLLSQPLFQENLKTRYPTQSGRPPQPVLASRNIESALSCLSRQKRRRKK 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 148/597 (25%)
DEADc 74..277 CDD:238167 79/348 (23%)
HELICc 311..437 CDD:238034 41/125 (33%)
DUF4217 474..530 CDD:290667 10/55 (18%)
Ddx24NP_001152974.1 SrmB 238..787 CDD:223587 144/614 (23%)
P-loop_NTPase 241..557 CDD:304359 73/317 (23%)
Helicase_C 619..727 CDD:278689 38/110 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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