DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5800 and C24H12.4

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_740966.1 Gene:C24H12.4 / 173432 WormBaseID:WBGene00016073 Length:634 Species:Caenorhabditis elegans


Alignment Length:550 Identity:145/550 - (26%)
Similarity:240/550 - (43%) Gaps:111/550 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GRKSG---DNSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAES 90
            |||..   ..||...||::.:| |...:.:..|.:.::        |.||.|.|.::..|::.|.
 Worm    52 GRKRKHRMKKSQAEKRQKLMES-LVGPQVDEMDFEPEH--------KTFADFGLDERILKSIGEL 107

  Fly    91 KFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVG--AIIISPT 153
            .:....|||...|..||:.|:::|.|.||||||.|||||:::.|.....:....||  |:||:||
 Worm   108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPT 172

  Fly   154 RELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRM-DQCNILICTPGRLLQHMDENPLFNTS 217
            :||..||::...|:.:...|...:.:...|.:.....: |:.::::.|||:||:.....|.:.| 
 Worm   173 KELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLLRMCSLRPEYCT- 236

  Fly   218 TMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGA 282
            .:..||:||||..|..|:::.:..|....||..|.|:.|||..:.:..|.:|.:..||       
 Worm   237 LVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDMTTLKKLFMTGPV------- 294

  Fly   283 TPREEPSASTKKT----PNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHL-KQKIIVFVAS- 341
                   .:.|.|    ||:     .:|.|......:.|::..:|.:..|..| ..:.|:||.: 
 Worm   295 -------ITIKLTEGDLPNS-----DQLTQYQLTCGSDEERFAILVAMFKLKLIVGRSILFVNTI 347

  Fly   342 --CKQAKYLYEIF----CKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVA------ 394
              |.:...:..:|    |.|....|         .:.|..:...|...|:.::.::||:      
 Worm   348 DRCYKLMLILRVFGLKSCILNSAMP---------ANSRCHVINQFNEGSYQIVIASDVSDADGSK 403

  Fly   395 --------------------------------SRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSAR 427
                                            |||:||..|:.||..|.||....||||.||:||
 Worm   404 LKEEIAGKSDEKPEKDEKKGKKASKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTAR 468

  Fly   428 NKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSP---RVK-IEAFLAQFPE---- 484
            ...:|..|....|||..: :..::|::|      |...:|:..|   |:| ::.||.:..|    
 Worm   469 GFNKGTALSFCIPSERAH-LEQIQEEIN------QQMGRKVLQPYEFRIKELDTFLLRTREALSK 526

  Fly   485 -LRATAQRAFLSYIKSVFLMRNKRLFNVFS 513
             .:...::|.|..|:.. |||:..|...|:
 Worm   527 CTKGVIKKARLKEIRQE-LMRSANLQTFFA 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 131/497 (26%)
DEADc 74..277 CDD:238167 69/205 (34%)
HELICc 311..437 CDD:238034 38/171 (22%)
DUF4217 474..530 CDD:290667 12/45 (27%)
C24H12.4NP_740966.1 SrmB 46..561 CDD:223587 145/549 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D973872at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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