DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5800 and B0511.6

DIOPT Version :9

Sequence 1:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster
Sequence 2:NP_492779.1 Gene:B0511.6 / 172954 WormBaseID:WBGene00015232 Length:544 Species:Caenorhabditis elegans


Alignment Length:519 Identity:171/519 - (32%)
Similarity:281/519 - (54%) Gaps:44/519 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KSGDNSQKRPRQEINKSRLAATEAEI-QDLKTKYAEIDATAIKKFAQFPLSKKT----------- 83
            |.|...:|.....:.:......|.|: ::.|.:..|...|.:.:|    |:|.|           
 Worm    18 KDGHEKKKAKEVVVEEPMEEEDEEEVEEEQKHQTEESSETKVSEF----LTKTTFASLEGKVNAN 78

  Fly    84 -QKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGA 147
             .||:....|...|::|..||.|.|:|||||.:|.||||||||||:|.:|.|....|.:.:|.|.
 Worm    79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGV 143

  Fly   148 IIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILICTPGRLLQHMDEN 211
            ||:||||||:.|.:..|.::.:..:.:.||::||.|...|:.::.: .:||:.||||||.|:...
 Worm   144 IIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVATPGRLLDHLQNT 208

  Fly   212 PLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNL-KDPV 275
            ..|....|:.|::|||||.||:||:..:..::.:.|..||::|||||.:..|.:|.:|.| .:||
 Worm   209 DNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPV 273

  Fly   276 YVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVA 340
            .|           |...|     |..|..|.|||.|:|...:.::.:|::|:|.:..:|::||.:
 Worm   274 RV-----------SVHEK-----AEEATVEGLQQGYIVAPSDKRLLLLFTFLKKNKTKKVMVFFS 322

  Fly   341 SCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNW 405
            ||...|:.:|:...:  ..|.::::|...|.:|...:..|.:....::..||||:||||.|||:|
 Worm   323 SCNSVKFHHELLNYI--DIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDW 385

  Fly   406 VVQLDCPEDVSQYIHRAGRSARNKT-RGECLLVLTPSEEEYM--ISALKEQLNIDIRCVQIDPKK 467
            :||.|..::..:||||.||:||... .|:.||||.|.|..::  :.|.|..||.    .:....|
 Worm   386 IVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLRYLKAAKVTLNE----FEFSWSK 446

  Fly   468 LFSPRVKIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRV 531
            :.:.:.::|..:::...|..:|:.|:..|:::......|.:|:|.::||.|.::|.|.:|.|.|
 Worm   447 VANIQSQLENLISKNYYLNKSAKEAYKCYLRAYDSHSLKDIFDVTNMDLTAVSKSFGFSVPPFV 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 155/457 (34%)
DEADc 74..277 CDD:238167 86/216 (40%)
HELICc 311..437 CDD:238034 42/126 (33%)
DUF4217 474..530 CDD:290667 14/55 (25%)
B0511.6NP_492779.1 DEADc 68..276 CDD:238167 83/218 (38%)
DEXDc 83..291 CDD:214692 87/223 (39%)
Helicase_C 312..407 CDD:278689 33/96 (34%)
DUF4217 450..508 CDD:290667 14/57 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D218522at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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